Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043246500.1 |
| length | 4466 |
| RNA type | mRNA |
| GC content | 0.37 |
| exon number | 13 |
| gene id | foxp3a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056706.1 |
| NCBI id | CM032075.1 |
| chromosome length | 24299999 |
| location | 12489197 ~ 12504153 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0048745 | smooth muscle tissue development | biological_process |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0033152 | immunoglobulin V(D)J recombination | biological_process |
| GO:0007519 | skeletal muscle tissue development | biological_process |
| GO:0055007 | cardiac muscle cell differentiation | biological_process |
| GO:0002053 | positive regulation of mesenchymal cell proliferation | biological_process |
| GO:0002329 | pre-B cell differentiation | biological_process |
| GO:0050679 | positive regulation of epithelial cell proliferation | biological_process |
| GO:0002639 | positive regulation of immunoglobulin production | biological_process |
| GO:0007389 | pattern specification process | biological_process |
| GO:0030324 | lung development | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003682 | chromatin binding | molecular_function |
| GO:0042803 | protein homodimerization activity | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| GO:0008301 | DNA binding, bending | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU94000 | lncRNA | downstream | 30340 | 12456048 ~ 12458857 (-) | True | G63486 |
| TU93879 | lncRNA | downstream | 152003 | 12336876 ~ 12337194 (-) | True | G63408 |
| TU93878 | lncRNA | downstream | 152374 | 12336114 ~ 12336823 (-) | True | G63407 |
| TU93877 | lncRNA | downstream | 153176 | 12335766 ~ 12336021 (-) | True | G63406 |
| TU93874 | lncRNA | downstream | 154592 | 12332456 ~ 12334605 (-) | True | G63404 |
| TU94134 | lncRNA | upstream | 145749 | 12648642 ~ 12649214 (-) | True | G63578 |
| TU94135 | lncRNA | upstream | 147390 | 12650283 ~ 12652814 (-) | False | G63579 |
| TU94136 | lncRNA | upstream | 148873 | 12651766 ~ 12652814 (-) | True | G63579 |
| TU94138 | lncRNA | upstream | 152194 | 12655087 ~ 12656136 (-) | True | G63581 |
| TU94139 | lncRNA | upstream | 152815 | 12655708 ~ 12657144 (-) | False | G63581 |
| XM_043246478.1 | mRNA | downstream | 157 | 12484451 ~ 12489040 (-) | False | tspy |
| XM_043246477.1 | mRNA | downstream | 157 | 12484451 ~ 12489040 (-) | True | tspy |
| XM_043246440.1 | mRNA | downstream | 10505 | 12463037 ~ 12478692 (-) | True | sema3ga |
| XM_043246497.1 | mRNA | downstream | 50866 | 12430425 ~ 12438331 (-) | True | stk38a |
| XM_043246523.1 | mRNA | upstream | 8558 | 12511451 ~ 12517641 (-) | True | suv39h1b |
| XM_043246575.1 | mRNA | upstream | 38775 | 12541668 ~ 12543903 (-) | True | taf10 |
| XM_043246558.1 | mRNA | upstream | 41498 | 12544391 ~ 12561466 (-) | True | efhd2 |
| XM_043246518.1 | mRNA | upstream | 63370 | 12566263 ~ 12574233 (-) | False | opn7c |
| XM_043246517.1 | mRNA | upstream | 63370 | 12566263 ~ 12572711 (-) | True | opn7c |
| XR_006251575.1 | other | downstream | 126102 | 12351246 ~ 12363095 (-) | False | kcnq2a |
| TU93842 | other | downstream | 224664 | 12263694 ~ 12264533 (-) | True | G63385 |
| unassigned_transcript_1295 | other | downstream | 691995 | 11797130 ~ 11797202 (-) | True | trnaf-gaa_1 |
| TU93692 | other | downstream | 709946 | 11778271 ~ 11779251 (-) | True | G63274 |
| TU93426 | other | downstream | 924792 | 11562278 ~ 11564405 (-) | False | G63095 |
| TU94636 | other | upstream | 1306535 | 13809428 ~ 13863250 (-) | True | G63933 |
| XR_006251614.1 | other | upstream | 2221315 | 14724208 ~ 14731391 (-) | False | slc20a1a |
| TU95023 | other | upstream | 2276638 | 14779531 ~ 14781710 (-) | True | G64228 |
| TU95181 | other | upstream | 2780968 | 15283861 ~ 15284130 (-) | True | G64353 |
| XR_006251609.1 | other | upstream | 3146333 | 15649226 ~ 15700896 (-) | False | mvb12bb |
