Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU94394 |
| length | 1235 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G63751 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056706.1 |
| NCBI id | CM032075.1 |
| chromosome length | 24299999 |
| location | 13347624 ~ 13350271 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0010927 | cellular component assembly involved in morphogenesis | biological_process |
| GO:0055001 | muscle cell development | biological_process |
| GO:0055002 | striated muscle cell development | biological_process |
| GO:0031032 | actomyosin structure organization | biological_process |
| GO:0030239 | myofibril assembly | biological_process |
| GO:0032989 | cellular component morphogenesis | biological_process |
| GO:0030029 | actin filament-based process | biological_process |
| GO:0030036 | actin cytoskeleton organization | biological_process |
| id | description |
|---|---|
| ko00500 | Starch and sucrose metabolism |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU94388 | lncRNA | downstream | 15237 | 13332164 ~ 13332387 (-) | True | G63745 |
| TU94378 | lncRNA | downstream | 72756 | 13261692 ~ 13274868 (-) | True | G63735 |
| TU94346 | lncRNA | downstream | 101494 | 13185867 ~ 13246130 (-) | False | tafa3b |
| TU94341 | lncRNA | downstream | 216407 | 13128190 ~ 13131217 (-) | True | G63711 |
| TU94322 | lncRNA | downstream | 264252 | 12985654 ~ 13083372 (-) | True | zmynd12 |
| XR_006251607.1 | lncRNA | upstream | 269721 | 13619992 ~ 13682456 (-) | True | LOC122350567 |
| TU94556 | lncRNA | upstream | 337907 | 13688178 ~ 13693222 (-) | True | G63866 |
| TU94557 | lncRNA | upstream | 349386 | 13699657 ~ 13700068 (-) | True | G63867 |
| TU94558 | lncRNA | upstream | 360884 | 13711155 ~ 13712401 (-) | True | G63868 |
| TU94559 | lncRNA | upstream | 360884 | 13711155 ~ 13711368 (-) | False | G63868 |
| XM_043246790.1 | mRNA | downstream | 48649 | 13286754 ~ 13298975 (-) | True | LOC122350377 |
| XM_043246792.1 | mRNA | downstream | 60946 | 13276193 ~ 13286678 (-) | True | mov10b.2 |
| XM_043246845.1 | mRNA | downstream | 101499 | 13185867 ~ 13246125 (-) | True | tafa3b |
| XM_043246816.1 | mRNA | downstream | 283101 | 13045401 ~ 13064523 (-) | True | slc16a1b |
| XM_043246678.1 | mRNA | upstream | 1545 | 13351816 ~ 13369026 (-) | True | cttnbp2nlb |
| XM_043246192.1 | mRNA | upstream | 175302 | 13525573 ~ 13531588 (-) | True | ddx20 |
| XM_043246206.1 | mRNA | upstream | 195035 | 13545306 ~ 13551399 (-) | False | rap1aa |
| XM_043246207.1 | mRNA | upstream | 195035 | 13545306 ~ 13551247 (-) | True | rap1aa |
| XM_043246203.1 | mRNA | upstream | 202197 | 13552468 ~ 13558463 (-) | True | LOC122350013 |
| XR_006251575.1 | other | downstream | 984529 | 12351246 ~ 12363095 (-) | False | kcnq2a |
| TU93842 | other | downstream | 1083091 | 12263694 ~ 12264533 (-) | True | G63385 |
| unassigned_transcript_1295 | other | downstream | 1550422 | 11797130 ~ 11797202 (-) | True | trnaf-gaa_1 |
| TU93692 | other | downstream | 1568373 | 11778271 ~ 11779251 (-) | True | G63274 |
| TU93426 | other | downstream | 1783219 | 11562278 ~ 11564405 (-) | False | G63095 |
| TU94636 | other | upstream | 459157 | 13809428 ~ 13863250 (-) | True | G63933 |
| XR_006251614.1 | other | upstream | 1373937 | 14724208 ~ 14731391 (-) | False | slc20a1a |
| TU95023 | other | upstream | 1429260 | 14779531 ~ 14781710 (-) | True | G64228 |
| TU95181 | other | upstream | 1933590 | 15283861 ~ 15284130 (-) | True | G64353 |
| XR_006251609.1 | other | upstream | 2298955 | 15649226 ~ 15700896 (-) | False | mvb12bb |
