RNA id: TU94644



Basic Information


Item Value
RNA id TU94644
length 285
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G63941
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 13997682 ~ 13997966 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CATAGTCAGTGTCGTAGAAGATAATGAACTTCTGCCAGGTGTACTCCATCACCACTTGGAAGATGACATCATTTAGGTAGACGGGAGGCCGGACGAAGAGAGTGTAGTCGTCTGGTTGGGCACGACTGGTGGGTGGGCAGCTAGAGCGAGGAGTGCCAGCGGGTGCCCTCTGGATGAAGAGGTGCGGGATGTGCATTGCGTCAGCTAAAGACTGCAGCGACCCCGCGGACATACAGCCGATAGAGCTGACCAAGGCTAAGATACCTCTGTTCATCAACTCGCAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU94566 lncRNA downstream 272208 13725069 ~ 13725474 (-) True G63874
TU94565 lncRNA downstream 273682 13723731 ~ 13724000 (-) True G63873
TU94562 lncRNA downstream 280310 13716827 ~ 13717372 (-) False mc3r
TU94558 lncRNA downstream 285281 13711155 ~ 13712401 (-) True G63868
TU94559 lncRNA downstream 286314 13711155 ~ 13711368 (-) False G63868
TU94645 lncRNA upstream 8847 14006813 ~ 14007018 (-) True G63942
TU94647 lncRNA upstream 64531 14062497 ~ 14062740 (-) True G63944
TU94669 lncRNA upstream 101699 14099665 ~ 14100151 (-) True G63962
TU94670 lncRNA upstream 119764 14117730 ~ 14118002 (-) True G63963
TU94663 lncRNA upstream 130223 14128189 ~ 14128422 (-) True G63956
XM_043246301.1 mRNA downstream 277168 13716628 ~ 13720514 (-) True mc3r
XM_043247173.1 mRNA downstream 356200 13639945 ~ 13641482 (-) True cebpb
XM_043247714.1 mRNA downstream 382344 13608854 ~ 13615338 (-) True adipor1b
XM_043247715.1 mRNA downstream 382350 13608854 ~ 13615332 (-) False adipor1b
XM_043247848.1 mRNA downstream 389405 13599250 ~ 13608277 (-) True LOC122351021
XM_043246691.1 mRNA upstream 175088 14173054 ~ 14175823 (-) True LOC122350319
XM_043246693.1 mRNA upstream 183566 14181532 ~ 14186141 (-) True LOC122350320
XM_043246692.1 mRNA upstream 183566 14181532 ~ 14186139 (-) False LOC122350320
XM_043246690.1 mRNA upstream 189463 14187429 ~ 14190244 (-) True mpeg1.1
XM_043246031.1 mRNA upstream 195867 14193833 ~ 14194501 (-) True LOC122349900
TU94636 other downstream 134432 13809428 ~ 13863250 (-) True G63933
XR_006251575.1 other downstream 1634587 12351246 ~ 12363095 (-) False kcnq2a
TU93842 other downstream 1733149 12263694 ~ 12264533 (-) True G63385
unassigned_transcript_1295 other downstream 2200480 11797130 ~ 11797202 (-) True trnaf-gaa_1
TU93692 other downstream 2218431 11778271 ~ 11779251 (-) True G63274
XR_006251614.1 other upstream 726242 14724208 ~ 14731391 (-) False slc20a1a
TU95023 other upstream 781565 14779531 ~ 14781710 (-) True G64228
TU95181 other upstream 1285895 15283861 ~ 15284130 (-) True G64353
XR_006251609.1 other upstream 1651260 15649226 ~ 15700896 (-) False mvb12bb
XR_006251608.1 other upstream 1658953 15656919 ~ 15700896 (-) False mvb12bb

Expression Profile