RNA id: TU94662


Basic Information

Item Value
RNA id TU94662
length 6033
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G63955
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 14131391 ~ 14137423 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ccaCTGtagaaaacatgtttattagACAAATTATACACAGAAAGCTTTGCCACTTGTAACAGAGGCCTCAGTTTGTTCCATTTGAATAATATGCAACACATACAACAAAATAGGCCTatattaaatactgtacattataatcAGTTGAAAATGATGTAATCCTGTACAATTCtatgtatgaaattaaaaatgttacaggCATAGCAGGTTTTGCATGCTTCTTTTACCGAAAAAAAACCTTGCCTCCTTTTTGACAGAtttggaaattaaaatgaaatgaagtcGAATGCGAATGCCTTACCGTCAGAAACCGTGGAGAACTTCTTGAAATGTGATAGTGGCTAACTGAGCTTTACAAACTCAGATATTATACTCTATATCTTCTTTaaatccaacaaaaaaaaaatctgcatgtaaaatatacactttaatGTCTCTTCATTTactctaaataaaaatctttaaactgATACTAAATAAAATTGCTCCTATAGTCTTTCAGTAATCGTATCTTAAGAAAAGTACATCTAGAATGCTTGCGTCAAAACACTGTTGCTGTTCTCTACACACAACATTTGCGAATTAGTCAGAGGATAACAAACTGAAAGCTCATTCTAAACGACTAAcattagtaaatattaatacagtttaTGTTAGTGAAAAGGATTGGTTTGTTTTCTGTcctcaaaacatgttttttttttttttttaagctctcACCGCACCTCGATGGCCTTGTTTAAACAAttagcacttaaaaaaaaagttagataaATAGTACCCCTTAACGTTTAcgaaattaaatagaaatatatttcaaacaacCCTTCAAAAGTTGCCACCGTATCAGCGTTTTCAGATTGAGGACCGACacttgaaaagtaaaaaaaagccCTGTCTCCTAAGGCTCGTGTTAAGAATTCGTTTAAAAACCCTCTCACTCTTTGATTTTCGAAATCTATGATGCACAACCGCGGGATTGTGGCATATACAATGAAGCTATTctacagaatgtttttttgttgaatcCTAGGATATGGCTACAGAAGTGAGTACAAACTCTTAATGgtgcaaataaatgtaagatGATGGCACTGAAGcaatttcaaaacttaatcattaaaaaaaaaaagagaaaactaaaaCTACAGACAGCtctgaacactttttttgttgttaaaactCTCTGACCAGACACATTCCACGCATTAAAGATTCATTATACTTAAAGTCAGTAAGAGACATTTAGTAGCATTTGTTCCACCCCACattataataactttattattattaattttttttaatttttttaagttcattAGAGTCTTGTTCACAGAGTGTCCGTTTAAAGACTCAAAGTAGATCTCAACTTCAGGGAGACGGCAGAGAGGATGAGAGGTCTTTAGAAACACAGTCACTCACTGTGCAGCTTCAGAGAAAAGCCGACTGTTTTCTCTGAGTTTAGCAGCGCCATGTTGAATGTGTCAGCTAGAGGGAGTACTGAACGTTAACCGAGCGCTGATACGAAGCAAAATTCAGTCGATGAGTTGACAAGATTCTTCCAAACTGAGTTATTGCAGATCTGGGAAAACACTTGgcagtcttttgtttttttttcttcccgcaaaaaaaaaaaaaaaaaaatccaaaaaaggtAAACGTACTATCATGaaacatttgagtttttttttttttactccccAAGAAATCGAATGTGGCAAACAAAAGGCAAATTCATTTAGTTCACACAGAAAATCTCCCGACAAACCACAACGACAATAATTTTATTCCACCCTCGTCCTATCAGCGAGTTCGGTTGGGACGAACGAGCTCCATCGCGAAGAGCAAAGCCAAGAGAAAACGACAACCGAAAAggaacatttgtatttacatatatctCTTTTTTGTTTCCAACTCGTAGGCCCAGGAACCCCTGCAGTCTATATGGAGGTGCCCCTGTCCGGGTCGTTGCCGTAGCTGAAGTTGGGGGCCGGGGTGGGCTGATACGGGATGCTGGACATTGTCTTGACAGGGCTGCGAAAGAAGCCGCCGTTGGGGGCCCGTTGCCGGAAGGGCCCCCCAGTCCGGTGGTCCTGCACGGCCCCGAAGGCGAAGCCGGCTGCCGCTTTGGCCGACAGGCTGCGGCTGAGAGTCTGGATCTGCTCGGGGATGaaggtggtggtggtgatgtgCGTGTTGCGGAAGTCGCTGATCTGCTCCAGGGCCTGCCGGGCGGCCGGGAGGGAGTCCATGTCCAAGGGAGTCAGGTCGATGGAGGAGGTGGAGAACTGTTTGTGGGGGCTCTCATCCTCCGTGCATAAGCTGTTAACCCGGTGATGAAGGTGCTCCAGGTCGATCTCCTTATCGTCCTAGAGGAGGGGAGAACGGGAGGAGGAAAGTGGAGTGGGGAGGGGTGCGGGGAGAAAATAAGGAAGGAGAGAAGAACAGGAGGAGGAGCGAAGGTTGTTACAGGATCAGAGGAGAAAAGAGGTGTAAAGTGAAGAGAAGGGGTGTGTAATCGTAAGAGCAGATATAGCGGGATGGGTTAGTGAAGCGGGACGGCGCGGAGAGGTTAATAGGGGAAACGAGTGGGCGGTGGAAGAGGAAACGCAGGCAAAGAAAGGCGAGAAGAGGAAGGAAATGGTGAGCCAGTGAGATGGGAAGGTGTTTGGATGCGGTTGGGAATGGATGGAAACATCAAGAACATTTAGAAGAGGGTCGAGGGGGAGTGTCAATGGAGATTTAGCAGGCCCGATGAGGTTTTAGCGTTCGCATGGTTAGCAAGACAGAAGAAGAGGGGGGAGGAAGGTACAAAAAGGGAAACATACTGAGCTACGGTAATGAAAACACATCAGTCTTAACTAGTACTGTCCTTGGACTTATCGAGAACTATCAACAGCATTAATGCTATCGCGTgacacatacattttacaacacCTTTCCACTTTCAAGCCATGTGAAACCACGGTCGCTCGATTGTATCTTACAGTGCTAACATAATCTCTAAAATATGTGGATTGctgaaaacaaaaaccaaactcACGGGGTGACGTGGGCTGATATTGTGGCTGCAGTGAGATAAATGGCCTCTGGATTGGACCAGCATAAAGCACTTTGTTGATCGCAGCCACCAGCGGCAGGCAGCGTGGCCCTGAGTAAAGAGGGGCGGAGGGGGAACCCGGTCGGGCGAAGGGGGCGGGAGGTTGGGGGGCAGCTCGTAGGTACCTGTCCTACCACCACAGTGGAGGAAGGCAGTATAAAAGGGGTGTAGGAGTGAAGGGAACAGGGATCGTGGGAGGGCTGTTACATGACAGGACACATTTGTGGTGTTTCCTTGAACTAACGAGGGACCATGTGCCTTTCAGAATATACTTTGGTGTGTTGTGAAGttgcgttttttttgtttctgggGCAGGGTGAGATTGCTCAAAATATGACCCTAAACCAAAGATGTGGATGTGACCCTAGTGTGAAATCTTTAaaccagtggttctcaacctttTCAGCACAGCTATAATGGAGCTACATTCGGCATCTGTCCAACTTTATGCGACACAATGTGTAACTGAATATCTGACGGATTAGGTACACACGTATCACCTTTGTCTTCTGAAGCACGCACACAACGCAAAGACCAATTGTTGTCTAAAACTACAAATTAGGCTACATTATTGAGATCTCTTAGTCTAGATCTATTAGACTTCACAAAGGCATGAGAGGTACGATTTCagtttactttacattttaaaaagtctaattATTGCTCTGGTTTGACTATAGGTGCGAGTAAACGCTTATTGTCAATATATTCATCGAAACAATAAATGTGCTGGGTATTATTAACGTAAACGAAGTCTGTGAATACACTAATTGTTAATGATAATCCTTATATtggtctttaaaatatatttacatattaaaatatataaatttgtcTGCCCTGTTGGAAGTACAAGATTTGATTATAAATCTTACAATGTTAAATATAGACATCTTAGAAATTGTATTAATACGTATAAATGCATCATTTGAAGTTTCCCGGGGCCCCCTAGTGGCCCCTCTGGCGgagaaccactgctttaaacAACATCTGTATTTTATGAGCTGAATGTGCGATTGAGTACTGAATTAGGCACTTAGTCTGGCTACGCAACACCAATCTAAATATTGAACAAGATTCGCAAACGCCAGCTTGCTGGGAAAACGCCATTTATATGGGTCGCTCCACTCTAAAGCTGTTTGCGCTGTCATTTCCGCATCCTTTCAGCCAATTTTGCCTAGTCTCTATGCAGCTTGGCACTAATGTGGGTTTCAGATCAAAAATGAAGATCGCTAATGAAAATAGCCTGTACTGTTGCATTCCTGAGCGAAGTAACTGTAAATCTCTAGGTTTGACCTTCTTCGTAGCAACCTGTCGGATTCTCACTCAAATAGAAGTCCGTACAAAACGTATCGTAGCGCATTTGGTGCCTGGGGGGGGGGCCGTTTCACAACCTACGTGGGCTCGAGGCTTGGAGAAGTGTGGAAAGAGTGTAGCTCAGTGCTGGCAGAAGACAGTTCGCGACGGGATGGCGAACGTGTGCCTCAGCTTGGAGTCGAGGGGTGTGGCGCAGCATGCAGGTGACAGGTGATTGGAGGAAGGCCTGAGCGTGAGCATGATGTCAGTCTGCGGCTCATGACACGGCTCGTCTTGCCTCACAGACGGTCCGTCTgcttgtgtctgtgtgcgtgcgcgagcgagcgagcgagcgcgTGTGAAAGGACAGAGGCATGACCCAACACATGAGGCAGGCAGATGAGAGGATGGGAAAGAGGTTGTTTCAGAGAGGTGGGGGAATGAGTagaaaaagacaacaaacaaacagtcagCACACAGACGctggttttttttccttttttatgtcCAAGGAGCCAGATACCTGGAAGTGTGAGATggtaaaaatggcattttgcATTTCTCTCCCACGCCCGCTTTAACCCCTCAACACAGAGTACTTatctataaaacaaaatcaacaaaataaaaagttgtttcagGCTTTGACAGAAGAATaacatgacttttttcttttttttttttttggtcttttctgaaaaataatcaaacattttCAGAGTAATGACTGACACAGAATGCTGTTCGGCGTTCGGCGGCCTCGGTTTATTATGCGGCTACATGAGGTCTGACTTTCAAATACTCGCTATTAAAGTCACCGTGAATataatttcaatacattttctcCTTTGTGTAGGATTAAAAGATGGCATCGTAtattttatgccttttttttttttctcgctttTAAGATTGAAAAACAGTCGGGTATTTGAATGCAGACCTCATACTGTGGCCTAGAAACGCAGAGGCACCGCAGGACTCCAGACAGCCACAATATCAATGACACAGCAGACATCTGAGGTGAAGAACTTTTCATCATTTAGTTTTCCAGGAATGATTAGGACACAAAGCTTGGCATGTGAAATGACTTGTTCACACAGCAAAACGTCCGGTTCTCTGGACCCCTTGCTCGTCCTCTCTGGATTGGCAGGTGGTGCGCTATAAAAACTTGGGTGGCTATACGTAATTCATCACTATGAGTTTGAACTCGTTTTGACGACTTGTCGTACTGAATTATTTCAGATCAATTGCGACACCACAGAAGGAGCCGTGACGGCGAGATcacagagaaacagaggaaaCAGGGACAAACTAACACCGTGGCATAtgcaacgtgtgtgtgtgtgtgtgtgtcagacacagagacacaagcACAAAGTCATTCTATTGTTCTGATGTGCAATGAACTCAGTGTTAGCCAGGTGtcaagaaatattacaaagaaaagaagaagcagTCAAGAAGAATTAAGGATGCACCAAGACACTAGGACacagcaaaaagaaaagttgCATCATGCTGAAAGatgaaagaatgtttttttaaggatgTGCCAAAATGACAAttagaaaagacagaaaatgacaataaatactgcaaaaatgtgtattttttttgttttttccagttAAATC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU94663 lncRNA downstream 2969 14128189 ~ 14128422 (-) True G63956
TU94670 lncRNA downstream 13389 14117730 ~ 14118002 (-) True G63963
TU94669 lncRNA downstream 31240 14099665 ~ 14100151 (-) True G63962
TU94647 lncRNA downstream 68651 14062497 ~ 14062740 (-) True G63944
TU94645 lncRNA downstream 124373 14006813 ~ 14007018 (-) True G63942
TU94682 lncRNA upstream 65623 14203046 ~ 14203270 (-) True G63975
TU94683 lncRNA upstream 66219 14203642 ~ 14203921 (-) True G63976
TU94689 lncRNA upstream 127749 14265172 ~ 14265635 (-) True G63979
TU94690 lncRNA upstream 128303 14265726 ~ 14266043 (-) True G63980
TU94694 lncRNA upstream 131181 14268604 ~ 14269763 (-) True G63981
XM_043246301.1 mRNA downstream 410877 13716628 ~ 13720514 (-) True mc3r
XM_043247173.1 mRNA downstream 489909 13639945 ~ 13641482 (-) True cebpb
XM_043247714.1 mRNA downstream 516053 13608854 ~ 13615338 (-) True adipor1b
XM_043247715.1 mRNA downstream 516059 13608854 ~ 13615332 (-) False adipor1b
XM_043247848.1 mRNA downstream 523114 13599250 ~ 13608277 (-) True LOC122351021
XM_043246691.1 mRNA upstream 35631 14173054 ~ 14175823 (-) True LOC122350319
XM_043246693.1 mRNA upstream 44109 14181532 ~ 14186141 (-) True LOC122350320
XM_043246692.1 mRNA upstream 44109 14181532 ~ 14186139 (-) False LOC122350320
XM_043246690.1 mRNA upstream 50006 14187429 ~ 14190244 (-) True mpeg1.1
XM_043246031.1 mRNA upstream 56410 14193833 ~ 14194501 (-) True LOC122349900
TU94636 other downstream 268141 13809428 ~ 13863250 (-) True G63933
XR_006251575.1 other downstream 1768296 12351246 ~ 12363095 (-) False kcnq2a
TU93842 other downstream 1866858 12263694 ~ 12264533 (-) True G63385
unassigned_transcript_1295 other downstream 2334189 11797130 ~ 11797202 (-) True trnaf-gaa_1
TU93692 other downstream 2352140 11778271 ~ 11779251 (-) True G63274
XR_006251614.1 other upstream 586785 14724208 ~ 14731391 (-) False slc20a1a
TU95023 other upstream 642108 14779531 ~ 14781710 (-) True G64228
TU95181 other upstream 1146438 15283861 ~ 15284130 (-) True G64353
XR_006251609.1 other upstream 1511803 15649226 ~ 15700896 (-) False mvb12bb
XR_006251608.1 other upstream 1519496 15656919 ~ 15700896 (-) False mvb12bb

Expression Profile