RNA id: TU94670



Basic Information


Item Value
RNA id TU94670
length 273
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G63963
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 14117730 ~ 14118002 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCTGAGAGAAGATGTCCCTGTAGGGACTGCCATGCTGCATCGCGATGCCGTAGCCCCTGTCAGCCACATTGTTGCTCACGGTGTAGAGCGAGCAGTCCTCGTCGTTAATGGCCACATACTCCAGCACAGCTGCATCCCACACAAATGCAAAACGTCCGTACTTCACCTAAGAGGGTGAGAAAAAAGacacacatatgtacacaaAAGATCAGGAGAGTTATGAGAGACATGATTGAATTCACGCTCAAAGAAAAACAGGGCCGAATTCAAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU94669 lncRNA downstream 17579 14099665 ~ 14100151 (-) True G63962
TU94647 lncRNA downstream 54990 14062497 ~ 14062740 (-) True G63944
TU94645 lncRNA downstream 110712 14006813 ~ 14007018 (-) True G63942
TU94644 lncRNA downstream 119764 13997682 ~ 13997966 (-) True G63941
TU94566 lncRNA downstream 392256 13725069 ~ 13725474 (-) True G63874
TU94663 lncRNA upstream 10187 14128189 ~ 14128422 (-) True G63956
TU94662 lncRNA upstream 13389 14131391 ~ 14137423 (-) True G63955
TU94682 lncRNA upstream 85044 14203046 ~ 14203270 (-) True G63975
TU94683 lncRNA upstream 85640 14203642 ~ 14203921 (-) True G63976
TU94689 lncRNA upstream 147170 14265172 ~ 14265635 (-) True G63979
XM_043246301.1 mRNA downstream 397216 13716628 ~ 13720514 (-) True mc3r
XM_043247173.1 mRNA downstream 476248 13639945 ~ 13641482 (-) True cebpb
XM_043247714.1 mRNA downstream 502392 13608854 ~ 13615338 (-) True adipor1b
XM_043247715.1 mRNA downstream 502398 13608854 ~ 13615332 (-) False adipor1b
XM_043247848.1 mRNA downstream 509453 13599250 ~ 13608277 (-) True LOC122351021
XM_043246691.1 mRNA upstream 55052 14173054 ~ 14175823 (-) True LOC122350319
XM_043246693.1 mRNA upstream 63530 14181532 ~ 14186141 (-) True LOC122350320
XM_043246692.1 mRNA upstream 63530 14181532 ~ 14186139 (-) False LOC122350320
XM_043246690.1 mRNA upstream 69427 14187429 ~ 14190244 (-) True mpeg1.1
XM_043246031.1 mRNA upstream 75831 14193833 ~ 14194501 (-) True LOC122349900
TU94636 other downstream 254480 13809428 ~ 13863250 (-) True G63933
XR_006251575.1 other downstream 1754635 12351246 ~ 12363095 (-) False kcnq2a
TU93842 other downstream 1853197 12263694 ~ 12264533 (-) True G63385
unassigned_transcript_1295 other downstream 2320528 11797130 ~ 11797202 (-) True trnaf-gaa_1
TU93692 other downstream 2338479 11778271 ~ 11779251 (-) True G63274
XR_006251614.1 other upstream 606206 14724208 ~ 14731391 (-) False slc20a1a
TU95023 other upstream 661529 14779531 ~ 14781710 (-) True G64228
TU95181 other upstream 1165859 15283861 ~ 15284130 (-) True G64353
XR_006251609.1 other upstream 1531224 15649226 ~ 15700896 (-) False mvb12bb
XR_006251608.1 other upstream 1538917 15656919 ~ 15700896 (-) False mvb12bb

Expression Profile