RNA id: TU95443



Basic Information


Item Value
RNA id TU95443
length 374
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G64531
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 16459957 ~ 16460330 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GACGATTTTCAGCAGATGTACACCAGTCTTAGAATAATGGCTCTTTAATCAatattaagcaaacaaaaaaatcacattcatcaaaatagaaatcttttgcaaccTTATAAAAGTCTATACTTTTAAGATCGATTTAAGGCATCCTTACTTGACTTTAGTTTAGGGACAAATTTCAAAACGTATGTAGATTTAAAGGCGTGGGCTAAGGCTAGATATTTGAACCTTAGCGACCCTCCTCTTGTTAAAAGGTCAAATCTCTGAATATCAATGAACTGACTCTATCCAAACTGACCCCTTCAAGAGGAACCCAAAACTAGCATGCAGTCCCATCTGATGCCTCATCGACCTCCTCTGAACTCTTCTTGAATATCTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251563.1 lncRNA downstream 50261 16407854 ~ 16409696 (-) True LOC122350093
TU95412 lncRNA downstream 75052 16379861 ~ 16384905 (-) True G64508
TU95398 lncRNA downstream 82588 16377114 ~ 16377369 (-) True G64503
TU95397 lncRNA downstream 83360 16373321 ~ 16376597 (-) True G64502
XR_006251654.1 lncRNA downstream 176565 16261537 ~ 16283392 (-) True LOC122350933
TU95512 lncRNA upstream 97738 16558068 ~ 16661411 (-) True G64556
TU95543 lncRNA upstream 191228 16651558 ~ 16690514 (-) True G64582
TU95565 lncRNA upstream 222907 16683237 ~ 16683803 (-) True G64599
TU95612 lncRNA upstream 584124 17044454 ~ 17044971 (-) True G64634
TU95610 lncRNA upstream 586558 17046888 ~ 17053322 (-) False LOC122350945
XM_043247401.1 mRNA downstream 52559 16398576 ~ 16407398 (-) True LOC122350716
XM_043246367.1 mRNA downstream 96013 16353908 ~ 16363944 (-) True setd1bb
XM_043247379.1 mRNA downstream 115463 16313504 ~ 16344494 (-) True LOC122350700
XM_043247395.1 mRNA downstream 267613 16191087 ~ 16192344 (-) True LOC122350711
XM_043248019.1 mRNA downstream 467699 15967534 ~ 15992258 (-) False LOC122351126
XM_043247402.1 mRNA upstream 302967 16763297 ~ 16835560 (-) True LOC122350717
XM_043247728.1 mRNA upstream 586137 17046467 ~ 17096795 (-) False LOC122350945
XM_043247729.1 mRNA upstream 586137 17046467 ~ 17096791 (-) True LOC122350945
XM_043247727.1 mRNA upstream 586137 17046467 ~ 17096790 (-) False LOC122350945
XM_043246317.1 mRNA upstream 899055 17359385 ~ 17361850 (-) False zgc:194007
TU95424 other downstream 50293 16407834 ~ 16409664 (-) False LOC122350093
XR_006251609.1 other downstream 759061 15649226 ~ 15700896 (-) False mvb12bb
XR_006251608.1 other downstream 759061 15656919 ~ 15700896 (-) False mvb12bb
TU95181 other downstream 1175827 15283861 ~ 15284130 (-) True G64353
TU95023 other downstream 1678247 14779531 ~ 14781710 (-) True G64228
TU95703 other upstream 862730 17323060 ~ 17343739 (-) False LOC122350953
TU95705 other upstream 864714 17325044 ~ 17401228 (-) False LOC122350953
XR_006251564.1 other upstream 899055 17359385 ~ 17361850 (-) False zgc:194007
XR_006251566.1 other upstream 899055 17359385 ~ 17361850 (-) False zgc:194007
XR_006251565.1 other upstream 899055 17359385 ~ 17361850 (-) True zgc:194007

Expression Profile