RNA id: XM_043247729.1


Basic Information

Item Value
RNA id XM_043247729.1
length 3366
RNA type mRNA
GC content 0.43
exon number 8
gene id LOC122350945
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 17046467 ~ 17096795 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCGCCTGTGACCGGATCCTCCGGGCGTTTTCGACACGCGCTCGTGTGGAGATCAGTGGACTCCGCCTCCTACCTGCCACGCGCGCGCGCTTACCGCCGGATCAGAGCGTTCACGGTCCTCCGCTGACAGCACGCACTTCAGCTAACTATCTAAAACTGCCCTGCAAAGTTAGATGTAAGGCTAAAAAGCGAACGCCCTTTGGCCAGTATAACGCTCCCGTTTGTTTCAGTCCAGTGAAATTCTTTAGCGTCGTGAACACTGAACGCTCTGGCACAAACGAGTATGGACAGTTTCGGACTGTGCGGGGGAAAGATGCTAAACGTCAAGAAGTTGTGGATATAAACGGACAGAAGAACAGAGCTCGTTCCTAATATCCTATGGCTTGAAGTTTCAGGCTTCTTCCCTGGCCACAGCTCATGGATTTCCTCACGGAGTATCCCTACAATGACACTTATTATGACAACGGGACCGGGGCCCTCAACAGCACAAGCTGTGAGGCCAAGCATCAGTATAACTACTATGCCATGCTCCTGACTCTCCTCATCTTTGTCATTGTCTTCGGCAATGTATTGGTGTGTATGGCAGTCTCCCGAGAGAAAGCGCTGCAGACCACCACTAATTACCTCATTGTCAGCCTGGCGGTGGCAGATCTTCTCGTGGCCACATTAGTTATGCCCTGGGTGGTGTACCTTGAGGTGGTGGGGGAGTGGCGTTTCAGTAAAATCCATTGTGACGTGTTCGTCACCCTGGACGTCATGATGTGTACAGCCAGCATTCTTAATCTGTGTGCCATTAGTATTGACAGGTACACGGCTGTTGCCATGCCGATGTTGTACAACACACGCTACAGCTCCAAGAGACGAGTCACGGTAATGATCTCGGTGGTTTGGGTGCTTTCATTCGCTATTTCCTGCCCCTTGTTGTTCGGATTAAATAACACAGctACACGGGATGATACCGTATGTGAAATCGCCAACCCCGCTTTTGTTGTCTACTCCTCCATCATGTCATTCTACGTGCCCTTCATCATCACCCTTCTCGTGTACGTGCAGATCTACGTGGTTCTTCGTAAGCGTCGAAAACGGGTCAACACTAAACGGAGCTGCCAGAAGACAGACGCTGATGCTCTGCCCCCTCTCAAGGAAAAGTGCACTCATCCTGAAGATGTGAAATTGTGCACAGTTATCATTAAGACCAATGGGGGTTTACCTgcaaaaaacaagaaagcaCAACTAATAAAGGAAGTCCTGCACCAAGGTGGTGATGTGGGGGTGGACGTTACTCCATGCACCAGCCCTccagagaaaaagaaactggCATCCACTCTGGTCGTCGATCTGCTGGCCAATCCAAGCCCCATCCATGGCTCTCCCTCCCACGGTGAATGTCAGTCAAACGTAGATGAGAAAAATGGGCACGCCAAGGAGGTCCAGACCCCTAAAGAAGCCAAACCTGTTGAAACTCAGGCACTGCCCAATGGCAAAACCCGAACTACAGTGACCAAAACCATGAGCAAGAGAAAGATATCCCAGCATAAAGAAAAGAAGGCTACTCAGATGCTGGCTATTGTTCTAGgtgttttcattatttgctGGCTGCCCTTTTTTATTACTCACATTTTGAAAACTCACTGCACGAGCTGCGTGGTGCCGCTGGAAATGTACAATGCCTTCACTTGGCTGGGATATGTGAACAGTGCCGTCAACCCTATCATATATACCACTTTCAATGTGGAGTTCAGAAAGGCTTTCATAAAGATATTGCACTGCTGAGGACCTTATTCGCTGCACGCATAGACGAGGGGAGATGGAGGATTTCACAAGAGGTTAGTGCCATCTTTCACCGCCATGTGAAATGAGGGATTTACAAAGCCATGCTTTTAGGGCAGAGCGGAAGAACTCATTACAGAAAATGGAGGTTCAAATGAATGTAAAGTAAAGTTATATTTGTGTGTCTCCATTATTTCTGCCAGTGCATGTGCGAACCCGTTTCTTCTCTTTGGAACTGAAGtatgaatgtgattaattgtagAATTAAGGCAAATCTGAGATGATTGGCAATTGGATCTCACTACAGAGACTTTTATGCAAGCAGGGACCTGAATGTCGTACAGTAATTACATCGTTATATCAATTTAGTGGCGAGCAATTGGTTACAAAATGCTTACGGCTCTgttcaagtatttatttaatcaccgatctgtttctttgtttgagAACTTGTTAATAAAGAGATAGGTATTGTAAAGACAAATAAACAAGGTGAAAATGCCATTTACGGTTTTATAAAGCCAGACCACAAAGATACTAAAGGTGCACTCAGTAACTTTTTCTTTACGTTGCGCTggttattttaaacacatactGACACCCAGGAGCCTGGAGTGCAGAATtatgcaatttaaaagaacagctcacctaaaaatgatcatcccctgaaaatgtactcaccctcaggccatccaagatgtattTGTTTCATCACTGCAGCAGATTTGGAGAAGTTTTTGAGCATCGCCAGCTCAACAGTGGAATTCACTGCCAATGATCACAATAAATTTAgattatcgtgatgttttttatcagctgtttggacgttctgacggcacccattcactgcagaggatccgaTGGTGAGCCACTGACGCAGTGcaaaatttcttcaaatctgttttaatgcagtaacAAACTCAAGTTTATTGAGTAAATTTGAACTAAacgtttatttttgggtgaactatttctttcatttatctAGGAATTATGTTAATGATATGATGATTAGCCAAAATAAAGtagtatattatttaatatattatgttatatattaaaacatttatttacaaaaaaactgagCGCACCTTTAAGCAAATGGAAATGAATGCCTTTGACTTACCGACTATGAAGGacaatgtaaatatgaattaaatagttttattaaagcCCATGACAAAAATGATCATGCATGTTACATTGGTACTTCTCATAACATTGCAGCCAATGTATGTCTATAGTATTTTTGTGTACATCACCTGTACACAAACCTATCTGAACTATATAAAGGTGTGTCTatgttttttctgtctgttcacTGGAGTAAGTGTTTGATTTGACATGTGACAGTTCATTTTtgtggttgaaaaaaaaaattaagcacaattaatttgtgaaaaatagaaaaaaatctcCAGTAATAAAAGCGGTGTCACAATTTAAACTCGGCCATAAATATCCACTGCTCACCTTTTTTGAATCAGGCTTTGTGGATCACACACAGTTTTGGTGCAAAGTGCTATATTATACAGCATGATAATGAGCATTTGCTATGTTGCAGGTGAAGGTTATAACTGCACTACAAtttaagttc

Function

GO:

id name namespace
GO:0007195 adenylate cyclase-inhibiting dopamine receptor signaling pathway biological_process
GO:0071875 adrenergic receptor signaling pathway biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0004935 adrenergic receptor activity molecular_function
GO:0001591 dopamine neurotransmitter receptor activity, coupled via Gi/Go molecular_function

KEGG:

id description
K04145 DRD2; dopamine receptor D2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU95612 lncRNA downstream 1496 17044454 ~ 17044971 (-) True G64634
TU95543 lncRNA downstream 355953 16651558 ~ 16690514 (-) True G64582
TU95565 lncRNA downstream 362664 16683237 ~ 16683803 (-) True G64599
TU95512 lncRNA downstream 385056 16558068 ~ 16661411 (-) True G64556
TU95443 lncRNA downstream 586137 16459957 ~ 16460330 (-) True G64531
TU95704 lncRNA upstream 223585 17320376 ~ 17320972 (-) False LOC122350953
XR_006251657.1 lncRNA upstream 225685 17322476 ~ 17343705 (-) True LOC122350953
TU95712 lncRNA upstream 262645 17359436 ~ 17361850 (-) False zgc:194007
TU95713 lncRNA upstream 262645 17359436 ~ 17361850 (-) False zgc:194007
TU95714 lncRNA upstream 262645 17359436 ~ 17361850 (-) False zgc:194007
XM_043247402.1 mRNA downstream 210907 16763297 ~ 16835560 (-) True LOC122350717
XM_043247401.1 mRNA downstream 639069 16398576 ~ 16407398 (-) True LOC122350716
XM_043246367.1 mRNA downstream 682523 16353908 ~ 16363944 (-) True setd1bb
XM_043247379.1 mRNA downstream 701973 16313504 ~ 16344494 (-) True LOC122350700
XM_043247395.1 mRNA downstream 854123 16191087 ~ 16192344 (-) True LOC122350711
XM_043246317.1 mRNA upstream 262594 17359385 ~ 17361850 (-) False zgc:194007
XM_043247412.1 mRNA upstream 359351 17456142 ~ 17464579 (-) True rflna
XM_043246070.1 mRNA upstream 444035 17540826 ~ 17543078 (-) True prnpa
XM_043247723.1 mRNA upstream 455729 17552520 ~ 17567609 (-) True rassf2a
XM_043247724.1 mRNA upstream 455729 17552520 ~ 17563121 (-) False rassf2a
TU95424 other downstream 636803 16407834 ~ 16409664 (-) False LOC122350093
XR_006251609.1 other downstream 1345571 15649226 ~ 15700896 (-) False mvb12bb
XR_006251608.1 other downstream 1345571 15656919 ~ 15700896 (-) False mvb12bb
TU95181 other downstream 1762337 15283861 ~ 15284130 (-) True G64353
TU95023 other downstream 2264757 14779531 ~ 14781710 (-) True G64228
TU95703 other upstream 226269 17323060 ~ 17343739 (-) False LOC122350953
TU95705 other upstream 228253 17325044 ~ 17401228 (-) False LOC122350953
XR_006251564.1 other upstream 262594 17359385 ~ 17361850 (-) False zgc:194007
XR_006251566.1 other upstream 262594 17359385 ~ 17361850 (-) False zgc:194007
XR_006251565.1 other upstream 262594 17359385 ~ 17361850 (-) True zgc:194007

Expression Profile