RNA id: TU97177



Basic Information


Item Value
RNA id TU97177
length 344
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G65732
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 20881022 ~ 20881433 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCACTACTCTCTTGCATTATGGTCGAGGATGGTGCGTGTGAACTGACCACAGGCCCCTGCGGCCCGCTGTCCCTGAAGCGATTGGTCTCTTTGTGAAAGCTGTAGTTGGCTCCCGAGGCTTTGGCCACTTTCTGCATGATGGCTTCAGGCTCCACGTCCTCCTCCGCCCGTGCATTTATCGTCACGTGAGCTCCCTGCAGAAACAGCGCTGTCAGTTGTTTtttgtcccacacacattcacattctCAAAACTCAATTTACACACGCGTACGAAACCATCCGACGGAAGCGTCGAGATTCACAGATTTCAAGCGAAACATGCCCACGCACACTTTCCCTCAGCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU97154 lncRNA downstream 155568 20723266 ~ 20725454 (-) True G65717
TU97155 lncRNA downstream 159212 20718940 ~ 20721810 (-) False LOC122350336
TU97135 lncRNA downstream 270099 20610562 ~ 20610923 (-) False G65704
TU97136 lncRNA downstream 270099 20610562 ~ 20610923 (-) True G65704
TU97126 lncRNA downstream 310729 20567158 ~ 20570293 (-) True G65697
TU97172 lncRNA upstream 4791 20886224 ~ 20892629 (-) True G65728
TU97173 lncRNA upstream 4791 20886224 ~ 20890353 (-) False G65728
TU97200 lncRNA upstream 45178 20926611 ~ 20926980 (-) True G65750
TU97202 lncRNA upstream 46829 20928262 ~ 20928477 (-) True G65752
TU97213 lncRNA upstream 67765 20949198 ~ 20951698 (-) True G65759
XM_043247600.1 mRNA downstream 58970 20772439 ~ 20822052 (-) False tcf7l1b
XM_043247601.1 mRNA downstream 58970 20772442 ~ 20822052 (-) False tcf7l1b
XM_043247598.1 mRNA downstream 58971 20771693 ~ 20822051 (-) True tcf7l1b
XM_043247599.1 mRNA downstream 59755 20771693 ~ 20821267 (-) False tcf7l1b
XM_043247158.1 mRNA downstream 118535 20757808 ~ 20762487 (-) True tgoln2
XM_043247354.1 mRNA upstream 35595 20917028 ~ 20919100 (-) True LOC122350675
XM_043246857.1 mRNA upstream 50517 20931950 ~ 20943305 (-) False LOC122350417
XM_043246859.1 mRNA upstream 50517 20931950 ~ 20943304 (-) False LOC122350417
XM_043246858.1 mRNA upstream 50517 20931950 ~ 20943304 (-) True LOC122350417
XM_043246089.1 mRNA upstream 133560 21014993 ~ 21025831 (-) True gna14a
XR_006251697.1 other downstream 427891 20453031 ~ 20453131 (-) True LOC122351134
TU96506 other downstream 1447887 19428746 ~ 19433135 (-) False si:ch211-218o21.4
TU96509 other downstream 1447887 19428746 ~ 19433135 (-) True si:ch211-218o21.4
XR_006251696.1 other downstream 1678645 19202277 ~ 19202377 (-) True LOC122351133
TU96415 other downstream 1841471 19030987 ~ 19039551 (-) False LOC122350102
TU97752 other upstream 890035 21771468 ~ 21776620 (-) True G66086
TU97757 other upstream 903271 21784704 ~ 22254189 (-) True G66090
TU97796 other upstream 1132540 22013973 ~ 22025791 (-) True G66119
TU97791 other upstream 1147299 22028732 ~ 22031993 (-) True G66116
TU97805 other upstream 1183465 22064898 ~ 22068757 (-) False LOC122350973

Expression Profile