RNA id: TU97277


Basic Information

Item Value
RNA id TU97277
length 1423
lncRNA type inter_gene
GC content 0.39
exon number 2
gene id G65793
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 21013424 ~ 21014936 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tGTGCATGATTACACATTCTCACgagaaatgtatgcaaaaacaTTCATGCTTTTCTTTGCCTTTATAGCCAACAAGAAATGACATtcatatttctcaatattaccTCATGAACGTGATTCATTTCCAAATGAAAATGCCTAGAATTAtagtacactgaaaaaaaattctgtaatatttattcaaaacttAGGACTTGATGTAAGATATCTCGCTATTTGCTTTTATTGCTATAACCTTTATTAATGTTCAAGGAgaagttaatttttttacatttttatttaatttaatttaattttttgttttgctgtaaatgTACGTACTCTCAGGTCATCCGAGCTGTTAACGAGTTTGCTTCTTCATGCGactagatttggagaaattcagcattgcTTCGCTTTCTCACCAAAAGatgctcagcagtgaatgggtgccgtcagaaataaatccattgtTTTAGTGCGTTTGGTCTATAATCCGGAATATAAAAATCCatctcgtctgaatcaggaaCGAAATGCGCTCCGtctaaaagcaaaaacagttcTGAACAAACGTGGtgattttgacggcacccattcactgcagtatGCGACATTTGTTCAAACCTGTACATTTTTGGTCTAACTACTCCTTTAAATTTCTGCATTGACGATTTGAAAAGGCTGCAGACTAAAACGATGCCTAAACAGCTACTTTATTGATGTCTTATCATTTACAAGTCGCCCGAGAGGAACAATAAATATGATccgttttgatttcatgtcGTCTTTAATGTCAACTCACTGACATTCATTAAGAAAACGGACAACGGCAGCTTTACTAgaaaagctaaataataaacAGTTGCATATTTGTGTTATATTACAGTTCTTCAGTAACGCATCAAGACGTCGAGCAGTCGAGAAGCCATCGAGTGTTTACAGCCGAATATCAAGATCAACTGtagaattaattaaatagaCACTAAGAAACAAAATATCATTTCATGCAAagccacattttaaaaaaatatccctGCTCTCCTGTACAGTGCATACAGTATCCCGCTTCCTGGTCATTTCCGTTTCAACGTGATGCGCGTAAAGACaaattaaatatgtacagtGCATGGGTCTTTATTAACGTGTATATAAACGACACACTCTAGCGAAGAGACGCACGCTGTAAAGACTGTAATGGGTTTGGCGTTCAAGCAAATAAGGAACGGACAGACCGAGAAAGAAAGGTAGAATCTCGTGTAAACGCGCGGGCTAACAGTCATTACCGGTGCGGTGTTAGTCAACGACTGTTGCATTGTGGGTGTAACGTGAAGCGGCACGCTGCAAAAGCAGCGTCGAAGGCACACAGCAGGGCGCGGGATCGTGGCTTGGACCCTCCTCACTTGGGCAGGCTGTCCCTGGCATCTTCCAGCTTGGAAAGAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU97275 lncRNA downstream 1290 21008975 ~ 21012134 (-) True G65792
TU97226 lncRNA downstream 55466 20956934 ~ 20957958 (-) True G65764
TU97213 lncRNA downstream 61726 20949198 ~ 20951698 (-) True G65759
TU97202 lncRNA downstream 84947 20928262 ~ 20928477 (-) True G65752
TU97200 lncRNA downstream 86444 20926611 ~ 20926980 (-) True G65750
TU97278 lncRNA upstream 1536 21016472 ~ 21017235 (-) False gna14a
TU97337 lncRNA upstream 85148 21100084 ~ 21102552 (-) True G65835
XR_006251554.1 lncRNA upstream 231149 21246085 ~ 21247187 (-) True LOC122350047
TU97484 lncRNA upstream 334514 21349450 ~ 21352952 (-) True G65896
TU97486 lncRNA upstream 338826 21353762 ~ 21355716 (-) True G65897
XM_043246857.1 mRNA downstream 70119 20931950 ~ 20943305 (-) False LOC122350417
XM_043246859.1 mRNA downstream 70120 20931950 ~ 20943304 (-) False LOC122350417
XM_043246858.1 mRNA downstream 70120 20931950 ~ 20943304 (-) True LOC122350417
XM_043247354.1 mRNA downstream 94324 20917028 ~ 20919100 (-) True LOC122350675
XM_043247600.1 mRNA downstream 191372 20772439 ~ 20822052 (-) False tcf7l1b
XM_043246089.1 mRNA upstream 57 21014993 ~ 21025831 (-) True gna14a
XM_043246871.1 mRNA upstream 91924 21106860 ~ 21129774 (-) False klhl22
XM_043246870.1 mRNA upstream 105653 21120589 ~ 21129773 (-) False klhl22
XM_043246869.1 mRNA upstream 105653 21120589 ~ 21129773 (-) False klhl22
XM_043246874.1 mRNA upstream 105653 21120589 ~ 21129773 (-) False klhl22
XR_006251697.1 other downstream 560293 20453031 ~ 20453131 (-) True LOC122351134
TU96506 other downstream 1580289 19428746 ~ 19433135 (-) False si:ch211-218o21.4
TU96509 other downstream 1580289 19428746 ~ 19433135 (-) True si:ch211-218o21.4
XR_006251696.1 other downstream 1811047 19202277 ~ 19202377 (-) True LOC122351133
TU96415 other downstream 1973873 19030987 ~ 19039551 (-) False LOC122350102
TU97752 other upstream 756532 21771468 ~ 21776620 (-) True G66086
TU97757 other upstream 769768 21784704 ~ 22254189 (-) True G66090
TU97796 other upstream 999037 22013973 ~ 22025791 (-) True G66119
TU97791 other upstream 1013796 22028732 ~ 22031993 (-) True G66116
TU97805 other upstream 1049962 22064898 ~ 22068757 (-) False LOC122350973

Expression Profile