RNA id: TU97707



Basic Information


Item Value
RNA id TU97707
length 491
lncRNA type inter_gene
GC content 0.39
exon number 2
gene id G66046
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 21571117 ~ 21644683 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTAGATGAAAGCTCGACATTTTGAAATTAGTCAAATACAACTGTAATGTTTTGAATGCATAGTTTGCTTATAATGAGATACACAAGTTTTTGCTTGGATTTTTTCACCAAATAATCttactgtttattcatttattgaacaCATCATTCAGTGTGTCTGCAAGAACTGAAGAAATGCCGGAGAATGCATCACATTTGACACTGTCAATTTTTCttgcacgtacacacacacgcacgcacgcacgcacacacgcgcacgcacttAAAAAACATTCTGCAGTATGTACACAATCACAATCcgaaaaacagaagaaagaaagaaaacaaaaatgtaaacacacccTTTGTTTCAACATTCAGTCAATGTAAAATCTAAGTGTGCTGGTGTTTGCGTGCGCGTTAACATACACAcgcgcgctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacatacacacacaaacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU97458 lncRNA downstream 196526 21373243 ~ 21374591 (-) True G65871
TU97486 lncRNA downstream 215401 21353762 ~ 21355716 (-) True G65897
TU97487 lncRNA downstream 215401 21353762 ~ 21355716 (-) False G65897
TU97484 lncRNA downstream 218165 21349450 ~ 21352952 (-) True G65896
XR_006251554.1 lncRNA downstream 323930 21246085 ~ 21247187 (-) True LOC122350047
TU97735 lncRNA upstream 107085 21751768 ~ 21753615 (-) True G66071
TU97789 lncRNA upstream 365960 22010643 ~ 22013678 (-) True G66115
TU97806 lncRNA upstream 420215 22064898 ~ 22068757 (-) True LOC122350973
TU97807 lncRNA upstream 420215 22064898 ~ 22068757 (-) False LOC122350973
XR_006251666.1 lncRNA upstream 429004 22073687 ~ 22074471 (-) True LOC122350974
XM_043247462.1 mRNA downstream 57797 21506779 ~ 21513320 (-) False LOC122350763
XM_043247461.1 mRNA downstream 58370 21506779 ~ 21512747 (-) True LOC122350763
XM_043246073.1 mRNA downstream 138996 21416772 ~ 21432121 (-) True stc1
XM_043246071.1 mRNA downstream 168570 21400577 ~ 21402547 (-) True nkx2.7
XM_043246358.1 mRNA downstream 181977 21387691 ~ 21389140 (-) True nkx3-1
XM_043247175.1 mRNA upstream 53125 21697808 ~ 21729217 (-) True acsl2
XM_043247487.1 mRNA upstream 85971 21730654 ~ 21751680 (-) False prkg1l
XM_043247486.1 mRNA upstream 85971 21730654 ~ 21751680 (-) True prkg1l
XM_043247488.1 mRNA upstream 88431 21733114 ~ 21751680 (-) False prkg1l
XM_043247493.1 mRNA upstream 112992 21757675 ~ 21765505 (-) True rab7b
XR_006251697.1 other downstream 1117986 20453031 ~ 20453131 (-) True LOC122351134
TU96506 other downstream 2137982 19428746 ~ 19433135 (-) False si:ch211-218o21.4
TU96509 other downstream 2137982 19428746 ~ 19433135 (-) True si:ch211-218o21.4
XR_006251696.1 other downstream 2368740 19202277 ~ 19202377 (-) True LOC122351133
TU96415 other downstream 2531566 19030987 ~ 19039551 (-) False LOC122350102
TU97752 other upstream 126785 21771468 ~ 21776620 (-) True G66086
TU97757 other upstream 140021 21784704 ~ 22254189 (-) True G66090
TU97796 other upstream 369290 22013973 ~ 22025791 (-) True G66119
TU97791 other upstream 384049 22028732 ~ 22031993 (-) True G66116
TU97805 other upstream 420215 22064898 ~ 22068757 (-) False LOC122350973

Expression Profile