RNA id: TU97791



Basic Information


Item Value
RNA id TU97791
length 840
RNA type TUCP
GC content 0.52
exon number 8
gene id G66116
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 22028732 ~ 22031993 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTATGACTCCGCTGGTGTGGGCATCGATGGAGGAAACAGTAAGGAATGGGAAAACAACTGCAAGAACATCCACCTGATCAAGCAAACAGGAAAAGTCAAAGCGCTGGATGAGGAAATCAATAGGCAGCAGGATGTTGATCTGGATGTGGAGTTCGACGTGCACCTGGGAATCGCTCACACTCGATGGGCCACTCACGGCGTCCCCAGCCCCGTCAACAGCCACCCGCAAAGATCTGACAAGAACAACGAGTTTATTGTCATCCATAATGGAATCATCACCAACTACAAAGACTTGAAGAAGTTTCTGGAGAGTAAAGGCTATGACTTTGAGTCTGAGACGGACACGGAGACCATCGCTAAGCTGGTGAAGTACATGTATGACAACCGGGAGAACGATGACATCACCTTCGCCACCCTGGTGGAGCAAGTCACCCAGCAACTAGAAGGAGCTTTTGCCCTGGTCTTCAAAAGTGTGCACTATCCAGGAGAGGCAGTGGGCAGCAGGAGAGGAGGTCCGTTACTGATTGGAGTTAGAAGTGACCACAAGCTTTCCACAGATCACATCCCCATCCTGTATCGCTCCTCTGGTAAAGACAAAAAGAGCTGCAATACTCTGCCCAGGATGGACGAGGACACGTGTCTGTTTCCTGTGGACGAGAAAGCCGTGGAGTACTACTTTGCATCTGATGCCAGTGCTGTCATCGAGCACACCAATCGAGTCATCTTCCTCGAGGATGACGATATCGCAGCGGTGCGTGACGGGCGTCTCTCCATCCACCGGATCAAGCGGACGGCAGGAGATCACCCGGCCCGGGCCATCCAGACCCTGCAGATGGAGCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU97789 lncRNA downstream 15054 22010643 ~ 22013678 (-) True G66115
TU97735 lncRNA downstream 275117 21751768 ~ 21753615 (-) True G66071
TU97707 lncRNA downstream 384049 21571117 ~ 21644683 (-) True G66046
TU97806 lncRNA upstream 32905 22064898 ~ 22068757 (-) True LOC122350973
TU97807 lncRNA upstream 32905 22064898 ~ 22068757 (-) False LOC122350973
XR_006251666.1 lncRNA upstream 41694 22073687 ~ 22074471 (-) True LOC122350974
TU97817 lncRNA upstream 261446 22293439 ~ 22295953 (-) True G66131
TU97838 lncRNA upstream 332908 22364901 ~ 22365113 (-) True G66143
XM_043247261.1 mRNA downstream 85315 21923712 ~ 21943417 (-) False kansl3
XM_043247262.1 mRNA downstream 85315 21923712 ~ 21943417 (-) False kansl3
XM_043247259.1 mRNA downstream 85315 21923712 ~ 21943417 (-) True kansl3
XM_043247263.1 mRNA downstream 85316 21923712 ~ 21943416 (-) False kansl3
XM_043247264.1 mRNA downstream 88051 21923712 ~ 21940681 (-) False kansl3
XM_043247797.1 mRNA upstream 8078 22040071 ~ 22054375 (-) True LOC122350992
XM_043247763.1 mRNA upstream 28022 22060015 ~ 22067329 (-) False LOC122350973
XM_043246221.1 mRNA upstream 43017 22075010 ~ 22110087 (-) True antxr1a
XM_043246010.1 mRNA upstream 113530 22145523 ~ 22146997 (-) True LOC122349886
XM_043245990.1 mRNA upstream 127993 22159986 ~ 22161558 (-) True LOC122349876
TU97796 other downstream 2941 22013973 ~ 22025791 (-) True G66119
TU97752 other downstream 252112 21771468 ~ 21776620 (-) True G66086
XR_006251697.1 other downstream 1575601 20453031 ~ 20453131 (-) True LOC122351134
TU96506 other downstream 2595597 19428746 ~ 19433135 (-) False si:ch211-218o21.4
TU96509 other downstream 2595597 19428746 ~ 19433135 (-) True si:ch211-218o21.4
TU97805 other upstream 32905 22064898 ~ 22068757 (-) False LOC122350973
TU97809 other upstream 47458 22079451 ~ 22097808 (-) False antxr1a
TU97810 other upstream 50028 22082021 ~ 22096062 (-) False antxr1a
TU97793 other upstream 229246 22261239 ~ 22265815 (-) False gfpt1
TU97794 other upstream 229392 22261385 ~ 22265815 (-) False gfpt1

Expression Profile