RNA id: TU97794



Basic Information


Item Value
RNA id TU97794
length 393
RNA type TUCP
GC content 0.54
exon number 3
gene id gfpt1
representative False

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 22243202 ~ 22265861 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CAGAACTAGGAACTAAACGGCTCTTGGCAGCAGCACCGGAGACATGTGTGGCATCTTCGCATATCTGAATTATCACGTGCCTCGCACTCGCCGTGAGATCCTCGAGGTCCTTATCAAGGGCCTGCATCGCCTGGAGTACCGCGGCTATGACTCCGCTGGTGTGGGCATCGATGGAGGAAACAGTAAGGAATGGGAAAACAACTGCAAGAACATCCACCTGATCAAGCAAACAGGAAAAGTCAAAGCGCTGGATGAGGAAATCAATAGGCAGCAGGATGTTGATCTGGATGTGGAGTTCGACGTGCACCTGGGAATCGCTCACACTCGATGGGCCACTCACGGCGTCCCCAGCCCCGTCAACAGCCACCCGCAAAGATCTGACAAGAACAACGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251666.1 lncRNA downstream 186914 22073687 ~ 22074471 (-) True LOC122350974
TU97806 lncRNA downstream 192628 22064898 ~ 22068757 (-) True LOC122350973
TU97807 lncRNA downstream 192628 22064898 ~ 22068757 (-) False LOC122350973
TU97789 lncRNA downstream 247707 22010643 ~ 22013678 (-) True G66115
TU97735 lncRNA downstream 507770 21751768 ~ 21753615 (-) True G66071
TU97817 lncRNA upstream 27624 22293439 ~ 22295953 (-) True G66131
TU97838 lncRNA upstream 99086 22364901 ~ 22365113 (-) True G66143
TU97837 lncRNA upstream 99461 22365276 ~ 22365682 (-) True G66142
TU97845 lncRNA upstream 111095 22376910 ~ 22378639 (-) True G66147
TU97871 lncRNA upstream 120267 22386082 ~ 22387783 (-) True G66163
XM_043245990.1 mRNA downstream 99827 22159986 ~ 22161558 (-) True LOC122349876
XM_043246010.1 mRNA downstream 114388 22145523 ~ 22146997 (-) True LOC122349886
XM_043246221.1 mRNA downstream 151298 22075010 ~ 22110087 (-) True antxr1a
XM_043247763.1 mRNA downstream 194056 22060015 ~ 22067329 (-) False LOC122350973
XM_043247797.1 mRNA downstream 207010 22040071 ~ 22054375 (-) True LOC122350992
XM_043246626.1 mRNA upstream 17534 22283349 ~ 22290847 (-) True naa35
XM_043247068.1 mRNA upstream 58971 22324786 ~ 22364823 (-) False ntrk2a
XM_043247067.1 mRNA upstream 58971 22324786 ~ 22364823 (-) False ntrk2a
XM_043247066.1 mRNA upstream 58971 22324786 ~ 22364822 (-) True ntrk2a
XM_043247981.1 mRNA upstream 100585 22366400 ~ 22370617 (-) False rmi1
TU97757 other downstream 7196 21784704 ~ 22254189 (-) True G66090
TU97809 other downstream 163577 22079451 ~ 22097808 (-) False antxr1a
TU97810 other downstream 165323 22082021 ~ 22096062 (-) False antxr1a
TU97805 other downstream 192628 22064898 ~ 22068757 (-) False LOC122350973
TU97791 other downstream 229392 22028732 ~ 22031993 (-) True G66116
XR_006251538.1 other upstream 371460 22637275 ~ 22640307 (-) True LOC122349902
TU98109 other upstream 529807 22795622 ~ 22796362 (-) True G66310
TU98104 other upstream 568872 22834687 ~ 22835591 (-) False ddx51
TU98264 other upstream 1311138 23576953 ~ 23583368 (-) True G66410
TU98323 other upstream 1392250 23658065 ~ 23663536 (-) True G66451

Expression Profile