RNA id: TU97809



Basic Information


Item Value
RNA id TU97809
length 887
RNA type TUCP
GC content 0.49
exon number 10
gene id antxr1a
representative False

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 22075010 ~ 22110087 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGCTGGCCAAGATCGCTGACAGCAAAGATCACGTCTTTCCGGTAAATGATGGCTTCGAAGCTCTGCAAGGTGTCATCGGCTCGATCTTAAAGAGATCCTGCATAGAGATCCTTGCTGCAGAACCTTCCAGCATCTGTGCCGGAGAGGTTTTCCAAGTCGTCGTGAGAGGAAATGGATTCCTTCATGCTAGAAATGTGGACAAGGTTCTTTGCAGCTTCAGAATAAATGACACTCTCACCAGAAtGGTGAAGCCATTAATTGTGGAGGACACGTATCTGCTCTGTCCAGCTCCTGTTCTTCGAGAGGAGGGAACGGCAGCCTCCCTTGACGTTAGCATGAATGAAGGCCTGAGTTTTATCTCTAGTTCTGTTACTATCACCACTGTAAGCTGTTCTGATGGAACGATCCTGGCCATAGCACTACTGATAGTGATGCTACTGCTGATTCTGGCTCTGCTCTGGTGGTTTTGGCCTCTCTGCTGCACTGTGATTATCCATGAACCTCCACCACCAGTAGTGGAAGACAGTTCGGATGAAGAAGAGGATGGAACTCCGAAGAAGAAGTGGCCCACAGTCGATGCATCCTACTATGGAGGAAGAGGAGTCGGAGGCATTAAAAGAATGGAGGTTCGCTGGGGTGAGAAAGGTTCGACCGAGGAGGGTGCTAAACTGGAGAAGGCGAAGAACGCGAGGGTAAAGATGCCTGAGCAAGAGTTTGAAGCTCTTCCTGCTCGCATCCTAAATAATGGCATGCGAAAACCTCCAGGCCCTCGTAAATGGTACTCGCCCATTAAGGGAAAACTGGATGCATTGTGGGTGCTTCTGAAGAAAGGGTATGACAGAGTGTCCATCATGCGACCGCAACCTGGAGACAAGGTAAGgctttta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251666.1 lncRNA downstream 4980 22073687 ~ 22074471 (-) True LOC122350974
TU97806 lncRNA downstream 10694 22064898 ~ 22068757 (-) True LOC122350973
TU97807 lncRNA downstream 10694 22064898 ~ 22068757 (-) False LOC122350973
TU97789 lncRNA downstream 65773 22010643 ~ 22013678 (-) True G66115
TU97735 lncRNA downstream 325836 21751768 ~ 21753615 (-) True G66071
TU97817 lncRNA upstream 195631 22293439 ~ 22295953 (-) True G66131
TU97838 lncRNA upstream 267093 22364901 ~ 22365113 (-) True G66143
TU97837 lncRNA upstream 267468 22365276 ~ 22365682 (-) True G66142
TU97845 lncRNA upstream 279102 22376910 ~ 22378639 (-) True G66147
TU97871 lncRNA upstream 288274 22386082 ~ 22387783 (-) True G66163
XM_043247763.1 mRNA downstream 12122 22060015 ~ 22067329 (-) False LOC122350973
XM_043247797.1 mRNA downstream 25076 22040071 ~ 22054375 (-) True LOC122350992
XM_043247262.1 mRNA downstream 136034 21923712 ~ 21943417 (-) False kansl3
XM_043246010.1 mRNA upstream 47715 22145523 ~ 22146997 (-) True LOC122349886
XM_043245990.1 mRNA upstream 62178 22159986 ~ 22161558 (-) True LOC122349876
XM_043247911.1 mRNA upstream 145394 22243202 ~ 22265861 (-) True gfpt1
XM_043246626.1 mRNA upstream 185541 22283349 ~ 22290847 (-) True naa35
XM_043247068.1 mRNA upstream 226978 22324786 ~ 22364823 (-) False ntrk2a
TU97805 other downstream 10694 22064898 ~ 22068757 (-) False LOC122350973
TU97791 other downstream 47458 22028732 ~ 22031993 (-) True G66116
TU97796 other downstream 53660 22013973 ~ 22025791 (-) True G66119
TU97752 other downstream 302831 21771468 ~ 21776620 (-) True G66086
XR_006251697.1 other downstream 1626320 20453031 ~ 20453131 (-) True LOC122351134
TU97793 other upstream 163431 22261239 ~ 22265815 (-) False gfpt1
TU97794 other upstream 163577 22261385 ~ 22265815 (-) False gfpt1
XR_006251538.1 other upstream 539467 22637275 ~ 22640307 (-) True LOC122349902
TU98109 other upstream 697814 22795622 ~ 22796362 (-) True G66310
TU98104 other upstream 736879 22834687 ~ 22835591 (-) False ddx51

Expression Profile