RNA id: TU97902



Basic Information


Item Value
RNA id TU97902
length 653
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G66183
representative False

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 22512179 ~ 22513245 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


atgtagatctGACTCATGATACAATAAGGATTCCTGCAGAGcaattaaagatatttacatACGTCTAATGCATATTGCAACTTATTCACAAATGCATGAAATTCAGCTTTATGTCTTAACCAGTGCGACGAGTGataatctataaaatattacgGATGACCGACCCACCAACAAACACCGCCTTCGCACAAGCGCAGGCTAAAAACATTTCCTCCACACTTGCCGTCTCAAGAAGGTCTGTAGCTAATATGTGTTTAAAGGAGTGCGAGGACACACGCTTTTGCCCCTTTTTCTAACAGCCGTGTGAGTGAGTAGTCTCTAGAAAACTCAAGCATCCTTCTACGTTACTGTACGTTGATGACAAAGAGGAGTGCTGGGTATTTGATTATGTAGAAAGCAATGGCATCAGTCAGCCGAGCCTCACATCACTGGACTTCCTTTTCAACGTTCACATCCTCTTCCTTCACCTGCGAGATTCCCTGCAGCTTCAGCTTCACGATACCGTCCTCGAACCCCCGATACAACACGTCACCTCCATCCTCCTGCACCGTGGGCCTGAGGGACGCGTGCAAACAGAAAGCGAGCGGCTGAACGAACTCAAGACCCGACAAAGGCAGAGAGATCGCCTTCATGAGGCGAATAAATTTGTATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU97674 lncRNA upstream 223332 22288308 ~ 22288847 (+) True G66024
TU97672 lncRNA upstream 226747 22283734 ~ 22285432 (+) True G66022
TU97633 lncRNA upstream 268886 22010649 ~ 22243293 (+) True G65998
TU97910 lncRNA downstream 17008 22530253 ~ 22531750 (+) True G66189
TU97912 lncRNA downstream 19818 22533063 ~ 22534817 (+) False LOC122350000
TU97916 lncRNA downstream 19818 22533063 ~ 22534817 (+) False LOC122350000
TU97979 lncRNA downstream 209257 22722502 ~ 22723361 (+) False mfsd2al2
TU97981 lncRNA downstream 209257 22722502 ~ 22723908 (+) False mfsd2al2
XM_043246168.1 mRNA upstream 18215 22459937 ~ 22493964 (+) True opn7d
XM_043247398.1 mRNA upstream 73808 22395147 ~ 22438371 (+) False frmd3
XM_043247397.1 mRNA upstream 73808 22395148 ~ 22438371 (+) True frmd3
XM_043246361.1 mRNA upstream 118177 22385203 ~ 22394002 (+) False gkap1
XM_043246363.1 mRNA upstream 118177 22385360 ~ 22394002 (+) True gkap1
XM_043246176.1 mRNA downstream 19223 22532468 ~ 22540233 (+) True LOC122350000
XM_043246014.1 mRNA downstream 28553 22541798 ~ 22549058 (+) True LOC122349889
XM_043247882.1 mRNA downstream 41622 22554867 ~ 22558195 (+) True LOC122351043
XM_043246068.1 mRNA downstream 134603 22647848 ~ 22659247 (+) True sypb
XM_043246643.1 mRNA downstream 147904 22661149 ~ 22673282 (+) True plp2b
TU97654 other upstream 391383 22119913 ~ 22120796 (+) True G66011
TU97652 other upstream 394345 22116283 ~ 22117834 (+) True G66010
TU97627 other upstream 547621 21963514 ~ 21964558 (+) False LOC122350768
TU97624 other upstream 550334 21951413 ~ 21961845 (+) False G65995
TU98063 other downstream 470795 22984040 ~ 22985584 (+) False mfn2
TU98168 other downstream 541381 23054626 ~ 23151947 (+) False prdm16
TU98282 other downstream 1119138 23632383 ~ 23634065 (+) False ndufa7
TU98369 other downstream 1239323 23752568 ~ 23783631 (+) False acot7
TU98363 other downstream 1240216 23753461 ~ 23783631 (+) False acot7

Expression Profile