RNA id: XM_043247504.1


Basic Information

Item Value
RNA id XM_043247504.1
length 2343
RNA type mRNA
GC content 0.45
exon number 13
gene id wrap73
representative False

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 22899436 ~ 22925768 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCTCGGACACGTCACTTCCGAAACAGTAGCGATTCGGTTAGAGCTCGTTTGATTGAGAGCGTTGGTTCTTATGagtgtctttttgttttatcctgcaaatgtcttaaaataatcGACCAAACACTCTTCGGATCAGTCCGTCAAAAAGCATGAATTTCTCCGAGATCTTCAAGCAGTCCAATCAACTGTGCAAAGTTTCTCCAGATGGAAAATACTTGGCCACCTGTGTTCAGTACCGTCTGGTGGTCCGTGATTTCAACAGCCTTCAGATCGTGCACCTGTACACATGCCTGGACCAAGTGATGCACATGGAGTGGTCCTCTGACTCCCTCTTCATCCTTTGTGCCATGTACAAAAGAGGACTGGTGCAGGTGTGGTCTCTAGAGCAGCCGGACTGGCATTGTAAGATAGACGAGGGTTCGATTGGACTAGTCTCATCACGCTGGAGTCCTGACGGGCGACACATACTCAACACCACGGAGTTCAATTTGAGGGTTACCGTCTGGTCCCTGTGCACAAAATCCGTGTCGTACATCAAGTATCCTAAAGCCTGCCAGAAAGgCGTGGACTTCACCGCAGACGGTCGTTATATGGCTCTGGCTGAGAGACGGGAGTGTAAGGACCACattagtgtgtttgtgtgcgacGACTGGCATCTTCTCAGACATTTTGAGAGCGAGACTCAGGATCTGGCGGGGCTGGAGTGGTCTCCTAACGGCTGCGTGCTTGCGGTGTGGGACAACTGTCTCGAGTATAAGATCCTGTTCTATTCACTGGACGGTCGCCTGTTGTCCTCCTACGGCGCGTATGAGTGGTCTCTAGGCATAAAGTCTGTCGCCTGGAGCCCCAGCAGCCAGTTCCTGGCCGTTGGCAGCTACGATGAGAAGGTTCGGATCCTGAATCATATCACCTGGAAGAAAATCACAGAATTCGAGCATCCGGCCACCATCATGAACACCAAAGCTGTGGTGTTTAAGGAAGTGGAGAAAAGACCTTTTGTGGGCAGTGAAGATCTCTCTGTTCATCAGCTGACTGTGGACAACTCGCTGTTTAGCACACAGAGCAAGTATGAGATCACACAGCTGCCAGCCCAGGTACCAGTAATCAAGCCCGATCCGGACCGAGCCAACCCCAAAATCGGCATTTCTGCTCTGGCTTTCAGTGCCGATAATCGCTTTCTTGCTACAAAGAATGATAACATGCCTCAGAGCCTGTGGGTGTGGGACATGCAGAGACTCGGTCTTCTAGCCGTCCTGGAGCAGACGGCTCCTGTGCGCTGCTTCGTCTGGGACCCTCGCAGACCTCGCCTGGCTCTCTGCACCGGAAACACCAAAGTTTATCTGTGGTCACCAGCTGGCTGCGTGTCTGTGAATGTACCGGTTGAAGGCGGTTTTCAGGTGCAGTCTCTGTTTTGGCACTGCAGTGGCAGCTCGCTCGTCCTGCTCTCAAAAGAGCACATCTGCCTGTGTTACGTGGAAGCAGAGGACGAGAAATAAACTGAAGATCTCCATCCTGCAGCCCTACACGATACGAAGTGCTCCTGCATGAGCATGGGACTCACGGGAGAAATCACTGTTCCTGCAAATATACCTCAGCACTTTTTCATCAAACTTATGATTTCCCAGCAGTCTCTGAGGGAATAAAATGTGGTTTAATGTTTAAGCAGAGCACTAGCTAGCACAGATATTTAGCGTACGCGATATTCTCCAGCACCAGCCTAGTGCAAATGCTTCTTATGGCCTTACCATCTAAATTGCTGTCACATTtgtcacatatttattttctatctgtacgttttttttgttagtttttaagATGAATGTAAAGGGTTGTGAACGTCTgttatatttgattgtttttcctTAATGTTTAAGGGTAAACActagatttatttttgatacatttagAGCTATTTGTAATAAAGTtctgtttttaaagtaattttttcttctttaaaaaaaaaatggtgattCTTAAAACATCTGTCAAGAACATTTCGCCAAAAATTACTGTGATAGACTATTTCACTTTGTACATGGTTTATGTGGATTAACCACAAACGGTCAATTATTTAATctcacaatgtaaaaaaacactcCGAAACTATTTCCTGTTCTTGTGAGATTCAACTTGCATGAATccttttataaaaataagatgTATGACAACtgaaaagtgttaaaataaccATAATTTTACTTAAAGCGTGTGTATTACATAAATCAGTGTGATGACATTcaggcaacatttaaaaaaaaaaaaaaaatttaaactcgATTTAAACAGAAACCTGGAAGATTTAGGCTTGATTGGGGTGATAGAAACAGCATTTTACTGCAATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006251621.1 lncRNA upstream 4509 22909647 ~ 22911382 (+) True LOC122350789
TU98027 lncRNA upstream 115737 22799639 ~ 22800154 (+) True G66261
TU97971 lncRNA upstream 188447 22724582 ~ 22727444 (+) True fkbp1aa
TU98064 lncRNA downstream 59107 22984040 ~ 22986958 (+) False mfn2
XR_006251648.1 lncRNA downstream 305110 23230043 ~ 23231024 (+) True LOC122350915
XR_006251646.1 lncRNA downstream 306631 23231564 ~ 23239812 (+) True LOC122350913
TU98170 lncRNA downstream 313044 23237977 ~ 23238253 (+) True G66344
TU98171 lncRNA downstream 480075 23405008 ~ 23405312 (+) False LOC122350936
XM_043246609.1 mRNA upstream 188914 22724596 ~ 22726977 (+) False fkbp1aa
XM_043246606.1 mRNA upstream 192812 22715379 ~ 22723079 (+) True mfsd2al2
XM_043246608.1 mRNA upstream 201776 22710095 ~ 22714115 (+) True fam110a
XM_043246639.1 mRNA upstream 206333 22673889 ~ 22709558 (+) False prickle3
XM_043246224.1 mRNA downstream 19277 22944210 ~ 22946154 (+) True LOC122350040
XM_043247808.1 mRNA downstream 31936 22956869 ~ 22968973 (+) True plod1a
XM_043247463.1 mRNA downstream 49062 22973995 ~ 22987162 (+) True mfn2
XM_043247681.1 mRNA downstream 129683 23054616 ~ 23401562 (+) True prdm16
XM_043247710.1 mRNA downstream 478780 23403713 ~ 23410561 (+) True LOC122350936
TU97654 other upstream 795095 22119913 ~ 22120796 (+) True G66011
TU97652 other upstream 798057 22116283 ~ 22117834 (+) True G66010
TU97627 other upstream 951333 21963514 ~ 21964558 (+) False LOC122350768
TU97624 other upstream 954046 21951413 ~ 21961845 (+) False G65995
TU98063 other downstream 59107 22984040 ~ 22985584 (+) False mfn2
TU98168 other downstream 129693 23054626 ~ 23151947 (+) False prdm16
TU98282 other downstream 707450 23632383 ~ 23634065 (+) False ndufa7
TU98369 other downstream 827635 23752568 ~ 23783631 (+) False acot7
TU98363 other downstream 828528 23753461 ~ 23783631 (+) False acot7

Expression Profile