RNA id: TU98109


Basic Information

Item Value
RNA id TU98109
length 741
RNA type TUCP
GC content 0.60
exon number 1
gene id G66310
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 22795622 ~ 22796362 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tcgtgcctacagtttgggctcgcggattcccaggtaacactgaggccacggcccggctacgtgcccaaggttcccactacccccttcagagaccaggtggtgaaccttcaagcgctgcccctggaggaggcagacccagccctgacgttgcttgtcccgtccgagcactaagatgctacgttgaccggacacaaagcttcaggacctcagtccagctctcgtttgtcacagaggccggcagaaggggagtgccgcctccaagcagaggatggctcactggatagtggacgccattaccctagcctaccaagcacagggtatgccctgccccccccctcaggttgcgggcacacacagcaagtgttgcatcgtcctgggcggtggcctgtggcacctcgctgacagatttgtagagctgcgggctgggcgaccccgaacacgattgctagattctatagcctacgtgtggaaccggtatcctcctgtgttctcacctcaaacgggtagaagcactgagaggcccggtttcgggtcggcttgttaaccgctccagagcgtccatacagtagaccctgtcgagctcctccatttccctcggcagccagatgttgcggagcgtccggcgccaggccctctcgatgaatccgtgagaaccggtgagggctgggagccatgtaaagtaccccaagaggactttatgtgtgtatttccacggcatagccttagagccccgtgtttccc

Function

GO:

id name namespace
GO:0070279 vitamin B6 binding molecular_function
GO:0030170 pyridoxal phosphate binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU98021 lncRNA downstream 58626 22736664 ~ 22736996 (-) False LOC122350259
TU97992 lncRNA downstream 90497 22699448 ~ 22705125 (-) True G66235
TU97955 lncRNA downstream 137963 22654971 ~ 22657659 (-) True G66217
TU97942 lncRNA downstream 170445 22580402 ~ 22625177 (-) True G66207
TU97941 lncRNA downstream 246304 22547651 ~ 22549318 (-) True G66206
TU98115 lncRNA upstream 130119 22926481 ~ 22931145 (-) True tprg1l
TU98162 lncRNA upstream 186349 22982711 ~ 22983165 (-) True G66337
TU98165 lncRNA upstream 188984 22985346 ~ 22986961 (-) True G66339
XR_006251647.1 lncRNA upstream 255520 23051882 ~ 23054592 (-) True LOC122350914
TU98198 lncRNA upstream 444610 23240972 ~ 23245510 (-) True G66368
XM_043246222.1 mRNA downstream 5135 22779254 ~ 22790487 (-) True LOC122350037
XM_043247865.1 mRNA downstream 35508 22757776 ~ 22760114 (-) True LOC122351034
XM_043246601.1 mRNA downstream 39437 22748545 ~ 22756185 (-) True LOC122350258
XM_043246602.1 mRNA downstream 48543 22732350 ~ 22747079 (-) True LOC122350259
XM_043246605.1 mRNA downstream 59462 22727180 ~ 22736160 (-) False LOC122350259
XM_043247830.1 mRNA upstream 16493 22812855 ~ 22816347 (-) True LOC122351014
XM_043246067.1 mRNA upstream 22607 22818969 ~ 22824591 (-) True LOC122349927
XM_043246223.1 mRNA upstream 32842 22829204 ~ 22835032 (-) True ddx51
XM_043246244.1 mRNA upstream 40747 22837109 ~ 22874896 (-) False aak1a
XM_043246243.1 mRNA upstream 40747 22837109 ~ 22874896 (-) False aak1a
XR_006251538.1 other downstream 155315 22637275 ~ 22640307 (-) True LOC122349902
TU97793 other downstream 529807 22261239 ~ 22265815 (-) False gfpt1
TU97794 other downstream 529807 22261385 ~ 22265815 (-) False gfpt1
TU97809 other downstream 697814 22079451 ~ 22097808 (-) False antxr1a
TU97810 other downstream 699560 22082021 ~ 22096062 (-) False antxr1a
TU98104 other upstream 38325 22834687 ~ 22835591 (-) False ddx51
TU98264 other upstream 780591 23576953 ~ 23583368 (-) True G66410
TU98323 other upstream 861703 23658065 ~ 23663536 (-) True G66451
TU98447 other upstream 1024138 23820500 ~ 23821991 (-) False LOC122350426
TU98558 other upstream 1458377 24254739 ~ 24268056 (-) True G66606

Expression Profile