RNA id: TU98371


Basic Information

Item Value
RNA id TU98371
length 817
RNA type TUCP
GC content 0.48
exon number 8
gene id acot7
representative False

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 23752568 ~ 23804049 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGCGATGTGTGGATGGAGGAAATGAATGAAAGACTGTCACTGTCGCGGATACGCTCACTGTTGGGAACTTCTCAAGTCTCTGTCGTCTAACTTTTAAGAAGTTATGGTGTCTCATTATGTGCTCAGCAGgATAATGCGTCCTGATGATGCCAACATTGTTGGCAATGTTCATGGTGGGACTATCCTAAAGATGATTGAGGAAGCGGGATGCATCATTGGCACACGCCATTGCAATACTCAGACTGGGGACCGCTGTGTAGCTGCTCTGGCTCGGGTGGAGCGCACAGACTTCCTGCACCCAGTGTTCATCGGTGAAGTAGCCCACGTCAGTGCTGAGATTACCTACACCTCCAAACACTCGGTGGAGGTGCAGGTTAATGTTCTCTCAGAGAACATAGTCACAGgtGCCAAAAAATTGACCAACAAGGCAACACTATGGTATGTCCCACTGTCCCTTCACAATGTGGCCAAAATCATTGAAGTTCCTCCTATTGAGTATTCTAGCCCAGAACAAGAGGAAGCAGGTAAAAAGAGATATGAAGCCCAGAAATTCGAGCGAATAGAGACTAAAGAGAGGAATGGCGAGATCAtagtttctgtctctcttccaGATAGACAAACAAAAGaGCCCTACACTGTTGCATTTAGCCAATCGAGTCTGATCCACCTCATAGGCCCATCTGACTGCACTCTACATGGCTTTGTACATGGAGGAGTGACCATGAAGCTGATGGATGAGGTGGCAGGGATTGTTGCTGCTCGGCACTGCAAGACCAACATTGTAACCGCATCAGTGGATGCCATTAACTTCCATCGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006251574.1 lncRNA upstream 73859 23676434 ~ 23681832 (+) True LOC122350145
TU98278 lncRNA upstream 132220 23620927 ~ 23623471 (+) True G66418
TU98273 lncRNA upstream 139009 23615216 ~ 23616682 (+) True G66416
TU98180 lncRNA upstream 320658 23434118 ~ 23435033 (+) True G66351
TU98176 lncRNA upstream 321946 23432809 ~ 23433745 (+) True G66350
XM_043246878.1 mRNA upstream 3260 23750246 ~ 23752431 (+) True hes2.2
XM_043247984.1 mRNA upstream 14460 23740350 ~ 23741231 (+) True hes2.1
XM_043246391.1 mRNA upstream 91257 23658081 ~ 23664434 (+) True ybx1
XM_043246392.1 mRNA upstream 91257 23658082 ~ 23664434 (+) False ybx1
XM_043247539.1 mRNA upstream 98840 23635192 ~ 23656851 (+) False ppih
XM_043246226.1 mRNA downstream 45035 23828666 ~ 23864915 (+) True LOC122350042
XM_043247778.1 mRNA downstream 87605 23871236 ~ 23898426 (+) False LOC122350978
XM_043247776.1 mRNA downstream 87607 23871238 ~ 23900075 (+) False LOC122350978
XM_043247775.1 mRNA downstream 87607 23871238 ~ 23900075 (+) True LOC122350978
XM_043247777.1 mRNA downstream 87607 23871238 ~ 23900075 (+) False LOC122350978
TU98282 other upstream 121626 23632383 ~ 23634065 (+) False ndufa7
TU98168 other upstream 603744 23054626 ~ 23151947 (+) False prdm16
TU98063 other upstream 770107 22984040 ~ 22985584 (+) False mfn2
TU97654 other upstream 1634895 22119913 ~ 22120796 (+) True G66011
TU97652 other upstream 1637857 22116283 ~ 22117834 (+) True G66010

Expression Profile


Homologous

species RNA id representative length rna type GC content exon number chromosome id location
grasscarp (Ctenopharyngodon idella) CI01000050_06833217_06853313.mRNA True 828 mRNA 0.46 7 CI01000050 6833089 ~ 6853350 (+)