RNA id: XM_043245990.1



Basic Information


Item Value
RNA id XM_043245990.1
length 689
RNA type mRNA
GC content 0.48
exon number 7
gene id LOC122349876
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 22159986 ~ 22161558 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CAAAATACACCTGTCCTGTGGCTAATATGGAATTCCAGCTCAACCGTCTGCGCACCTGTAACAGCTGTGGCTTCCAGAGGAGCTTCAGAGAGGATTACAACTACCTCTCTGTGGTCATCGGTCCTCGAGGATGCCTCATAGACAGCCTGCAGCAGTACTTCAAAaGATCTTCGTTTGACTGCTCATGCAGCGAGTGCGCCGGCTCTACAGCCTCTGAGGAGCTGGAAGTAATTGTCCTTCCACGcatcctggTGCTTCTGGTCATGCGTTTTGATATCGCATCCTCAATGTCCAAGCTGAAGGATCGACTGAAAGTCCCAAAAGAGTTTTCTCTGTCCTGCAGCACAGgTGGAAGCAtcagacagcagcagcacacaGTACAGACTATCTGCTGCTGTGTCACATCTGGGCAGAAGTTTGTATTGTGGGCACTACATCAGTCACATCCCTGACCTCAGTGGATCTGGATGGCTGGAATGCAGCGACTCATCCATCAGAAAATCCAGCTGGTCCAAAGCATCATGTAACATCGAGAGAAACGGATACATGCTCTTCTATGTGAAGAGCTGAGCAGAAGCTGATTGATGATGCAGTTTTGAAGAGGAAAGGAAACACTGCAGAGATGCATTCTGGAGAGATCTACATCAGTGTTTCACTGCAAGAAAAGCAGACTGCTcctaataaaaaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251666.1 lncRNA downstream 85515 22073687 ~ 22074471 (-) True LOC122350974
TU97806 lncRNA downstream 91229 22064898 ~ 22068757 (-) True LOC122350973
TU97807 lncRNA downstream 91229 22064898 ~ 22068757 (-) False LOC122350973
TU97789 lncRNA downstream 146308 22010643 ~ 22013678 (-) True G66115
TU97735 lncRNA downstream 406371 21751768 ~ 21753615 (-) True G66071
TU97817 lncRNA upstream 131881 22293439 ~ 22295953 (-) True G66131
TU97838 lncRNA upstream 203343 22364901 ~ 22365113 (-) True G66143
TU97837 lncRNA upstream 203718 22365276 ~ 22365682 (-) True G66142
TU97845 lncRNA upstream 215352 22376910 ~ 22378639 (-) True G66147
TU97871 lncRNA upstream 224524 22386082 ~ 22387783 (-) True G66163
XM_043246010.1 mRNA downstream 12989 22145523 ~ 22146997 (-) True LOC122349886
XM_043246221.1 mRNA downstream 49899 22075010 ~ 22110087 (-) True antxr1a
XM_043247763.1 mRNA downstream 92657 22060015 ~ 22067329 (-) False LOC122350973
XM_043247797.1 mRNA downstream 105611 22040071 ~ 22054375 (-) True LOC122350992
XM_043247263.1 mRNA downstream 216570 21923712 ~ 21943416 (-) False kansl3
XM_043247911.1 mRNA upstream 81644 22243202 ~ 22265861 (-) True gfpt1
XM_043246626.1 mRNA upstream 121791 22283349 ~ 22290847 (-) True naa35
XM_043247068.1 mRNA upstream 163228 22324786 ~ 22364823 (-) False ntrk2a
XM_043247067.1 mRNA upstream 163228 22324786 ~ 22364823 (-) False ntrk2a
XM_043247066.1 mRNA upstream 163228 22324786 ~ 22364822 (-) True ntrk2a
TU97809 other downstream 62178 22079451 ~ 22097808 (-) False antxr1a
TU97810 other downstream 63924 22082021 ~ 22096062 (-) False antxr1a
TU97805 other downstream 91229 22064898 ~ 22068757 (-) False LOC122350973
TU97791 other downstream 127993 22028732 ~ 22031993 (-) True G66116
TU97796 other downstream 134195 22013973 ~ 22025791 (-) True G66119
TU97793 other upstream 99681 22261239 ~ 22265815 (-) False gfpt1
TU97794 other upstream 99827 22261385 ~ 22265815 (-) False gfpt1
XR_006251538.1 other upstream 475717 22637275 ~ 22640307 (-) True LOC122349902
TU98109 other upstream 634064 22795622 ~ 22796362 (-) True G66310
TU98104 other upstream 673129 22834687 ~ 22835591 (-) False ddx51

Expression Profile