RNA id: XM_043246297.1


Basic Information

Item Value
RNA id XM_043246297.1
length 1594
RNA type mRNA
GC content 0.57
exon number 9
gene id LOC122350094
representative False

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1244834 ~ 1248364 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TAAGTCTTTGAGCCTAACAAACGGCGACGTCTCAGAACTAGTGTCTGATTTTGATCACAATTTGATTTTGTTAAATCAGCTGAGGTCAGACAGGAAAGTCACTCGTGGGCACTAATGGGCTCCTGTGgtgtgatgtcacttcctgctgGAGCGCTCAGGCCTCAATCAGAGTGTGTGATGGATGGGACGCTCTGCTCGTGGGCACACACTTGTTTGCGTGACTTCTCATAGTTTTCATACAAAGCCCCAGACTGAGCTCCGAGCAGCTGAGATGCGAGTCCTGGTCCTGATCCTGCTCTCGTCGCTGTGTGCTCCAGACCCTGCGCCGCTGAAAGACGCCACGGTCTATCTGAAGCCATACGCTTATTTACCTTCATCAAGCAGCGCTGAGCCTCAAGGGATTCAAGATGAGCAAATCAATAAGGCTCTCAGGATCTTCCAGCGTCATCAGGACATCAGAGCTCTGACCGTGAAGAGAGCGGCCCGCTGCGGTCTGAGCGAATCCTTCAGCCGTATGCTGACATACAGAGTCCTCGGTCAGTGGCGTAAGAAGAGACTGACGTACCGCTTCTATAACCACGCTCCGGCTCTGGGCTGGTCCGGGACACGAGCAGCGGTCCGCACGGCCTTCAGTTACTGGAGCGCGGTCAGTCCGCTTCTCTTCCTGGAGGTCAGCTCAGGTCACGCCGACATCAACATCGCCTTCCACCGGAGAGACCAGGGATGCCCGGTAGCGTTCGACGGACCCGGGCAGGTTCTGGGACACGCCGAGGGCCCGGAGTCTGGCGCGGTTCATTTTGACGCAGACGAGGTTTGGACAGAGGGGCAGAGTTACGGAGCAAACCTGCGAATCGTAGCGGCCCATGAGATAGGCCACGCCCTGGGACTAGGCCACTCCCAGTTCCCTGGTGCGCTCATGAGCCCTGTGTTCACCGGATACCAGCGCGACTTCAGACTGCACCCCGATGACATCCGCGGCATTCAGGCTCTGTACGGAAAACCTGTTGAGAAAGCATCCGGCGCTCAGAGAAAGCCCATGCCGGACCCCTGCTCCGCGGGACTGGACGCCCTCATGCTGGGGCCTCTTCAGAAGACGTTTGCATTCAGGGGTCATCACGTGTGGACCGTCTCAGATTTGGGAGATAGCGCTCCGATTTCCATCAGTACTTTGTGGAAAGAACTGCCCGGGAACATCAATGCAGCTGTTCACTCACAAAGAACCAACAAATCCTACTTTCTGAAAGGAGATCAAGTCTGGAGATATTCGGGCTTTAAACTGGACCACGGCTACCCAAAGCGCCTCGCCATCCCCTCCCACATCCAGGCGGCGTTCTTCCTCCGGAGCCGGCGAGCGCTCGTCTTCATCAAGGGATCCGAGTACTGGCTCTGGGATGAACTGGGATCAGCCAAACCTCTGAAGCTCCGCCCCAGGCTCCTGTCTGAGCTCAGCTCCGGTTTGCCCAGGGATCCGGACGCTGCCTTCAGCTCGAGCGACGGACGCGTCCATGTGTTCAGCCGAGAGCGCTTCTGGAGCCTGAGTCCCGCTCTGACGCCGCTCCGATCCACAGAGACATGGATGCGCTGTGACGACTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU88999 lncRNA downstream 26032 1214307 ~ 1218802 (-) True G60170
TU88974 lncRNA downstream 60185 1184308 ~ 1184649 (-) True G60154
TU88973 lncRNA downstream 122601 1120928 ~ 1122233 (-) True G60153
TU88952 lncRNA downstream 179634 1064397 ~ 1065200 (-) True G60133
TU88950 lncRNA downstream 182596 1061093 ~ 1062238 (-) True G60131
TU88994 lncRNA upstream 16235 1264599 ~ 1266232 (-) True G60166
TU89017 lncRNA upstream 20434 1268798 ~ 1269384 (-) True G60187
TU89018 lncRNA upstream 30636 1279000 ~ 1279303 (-) True G60188
TU89019 lncRNA upstream 63521 1311885 ~ 1312144 (-) True G60189
TU89024 lncRNA upstream 103603 1351967 ~ 1449930 (-) True G60192
XM_043247785.1 mRNA downstream 76377 1160400 ~ 1168457 (-) True ap3s1
XM_043247787.1 mRNA downstream 76377 1160619 ~ 1168457 (-) False ap3s1
XM_043248013.1 mRNA downstream 85548 1143871 ~ 1159286 (-) False commd10
XM_043247202.1 mRNA downstream 186907 1016890 ~ 1057927 (-) False dmxl1
XM_043247081.1 mRNA upstream 1696 1250060 ~ 1252516 (-) False pym1
XM_043247080.1 mRNA upstream 1696 1250060 ~ 1252516 (-) True pym1
XM_043246612.1 mRNA upstream 100807 1349171 ~ 1356953 (-) True LOC122350266
XM_043246610.1 mRNA upstream 198636 1447000 ~ 1454530 (-) True LOC122350264
XM_043247249.1 mRNA upstream 246141 1494505 ~ 1523464 (-) True dtx1
XR_006251689.1 other downstream 85588 1140698 ~ 1159246 (-) True commd10
TU88902 other downstream 106682 1135401 ~ 1138152 (-) True G60098
TU88852 other downstream 513214 727189 ~ 731620 (-) False LOC122349987
TU88755 other downstream 673861 565886 ~ 570973 (-) True ccl27a
TU89022 other upstream 103546 1351910 ~ 1356931 (-) False LOC122350266
TU89089 other upstream 328441 1576805 ~ 1578744 (-) True G60220
TU89090 other upstream 328441 1576805 ~ 1580616 (-) False G60220
TU89094 other upstream 353157 1601521 ~ 1605113 (-) False LOC122350657
TU89063 other upstream 484500 1732864 ~ 1787053 (-) False pi4kab

Expression Profile