RNA id: XM_043246544.1


Basic Information

Item Value
RNA id XM_043246544.1
length 1462
RNA type mRNA
GC content 0.39
exon number 6
gene id zgc:110353
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 12010488 ~ 12013150 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGAGCCCTCCTTCAGAAAAAAcaggtgtatttttaaaagacgAATATAAAACAGAAGAGATTATTACAGCTCCAGTCATCGTAGAAATAAGCTTACAGCAGCAATATAAACTTAGATTTAACCTGTTGTACCAGAAAATGACGATCAGGAAGTTCGCTATTGAGTACGACACCATAAATGATCGCAACACCTTTAGCAATCAGGATATTTTGGTGGGCAGAGTTATCGTGGACGTGtcaaagaaaaccaaaatcaATGCTCTGACTGTCCAGGCGAAAGGCAATGCAAATGTGTCATGGGATGAGACGCCAGCGGAAAGCACTGTGACGTACTGGGATACAGAAAAGTATTTCTCACTAACTCGGTCTGTCTTACCGGAGGATAACACAGATGgcTCTGTAACTCTTGTGGCTGGTAGACATGTCTTTGCTTTTGCCTTTCAGCTTCCCGACCAGGGCCTGCCTTCATCCTTTAAAGGTGCTCATGGTAAAATCCATTACCAACTTTTAGGCAAGTTGAGCAGGTCTATGCGTTCAGCCAGCGAAGCTAAAGCAAAGTTCACCTTCGTGGCCAAAGCTGATTATGATCATTCAACATTGATGGCACCTCAACATGGCAGTAAAGACAAGAATGTCAGTTTTTTTGCCTCTGGAAATATTTCAATGAATATTTTCTTGCCAAAGACAGGCTACCAGCAAGGTGAAAGACTAGTCGTCAACGGTGAGATTGTAAACAGCTCAACTCGAAAAATTGTGCCAAAGTACATTATCTACCAGAAACAAAGTTTCTTTGCTGGAGGCCAGAGAACTGTTCATACCACCCAGATACTGAAGGATAAGGGAGAACCTTTAAAATCCTCCACCAGACAGAATCTGTCCAAAGTATTAGTCCTTCCCACAGAAATCAGCACCACCATCCACAACTGCCGAATCCTCAAAGTCGAGTACAGACTACAGGTTATTTTGGATGTATCGTTCACTAAAAACCCCATGGTTAAACTCCCGTTTATCGTACTTCCTCTACATGATGGGACCTCAAAGAGTTGAAGGCTGGACTACACACAGACCTgtccaaaatgaatatttttaaattaatattagcaATGGGCTAGTTTTGTTTGCCCTTTTGATTTTACGCTTATTGTATCCTACtgtgaaaataatgtattttccAAAATAGGAAATCATATATGAAAAAGGGCAtatatttctcataattgccCAAAATAAAAACCCTTTCAAAATGTTCTCTACCTCATGCTGTTCcagacttttttcaaaaagaatattatatttcacagGAGAAAGAACGACATACAGGTTTGATATGAAATAACAGTAAACGATATCAACAatatcattaacattaaaatgaaggtAATCAgatttccttttaaataaatgtatttcagtgcTTCCGTCCATGCAAAAagattacaataatataaacataaatgcacATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93738 lncRNA downstream 154426 11855745 ~ 11856062 (-) True G63304
TU93660 lncRNA downstream 187244 11821284 ~ 11823244 (-) True G63254
TU93661 lncRNA downstream 187244 11821284 ~ 11823244 (-) False G63254
TU93477 lncRNA downstream 343008 11667166 ~ 11667480 (-) True G63134
TU93470 lncRNA downstream 345714 11663435 ~ 11664774 (-) True G63127
TU93792 lncRNA upstream 3576 12016726 ~ 12017351 (-) True G63344
TU93795 lncRNA upstream 6561 12019711 ~ 12019953 (-) True G63347
TU93798 lncRNA upstream 9365 12022515 ~ 12022753 (-) True G63350
TU93778 lncRNA upstream 38207 12051357 ~ 12052979 (-) True prok1
TU93808 lncRNA upstream 39981 12053131 ~ 12054530 (-) False prok1
XM_043246540.1 mRNA downstream 27179 11977200 ~ 11983309 (-) True adora1b
XM_043246465.1 mRNA downstream 35659 11970741 ~ 11974829 (-) True dclre1b
XM_043246571.1 mRNA downstream 119205 11883738 ~ 11891283 (-) False lhfpl5b
XM_043246570.1 mRNA downstream 124983 11883738 ~ 11885505 (-) True lhfpl5b
XM_043246582.1 mRNA downstream 167636 11841181 ~ 11842852 (-) True c8h1orf194
XM_043246585.1 mRNA upstream 38268 12051418 ~ 12053993 (-) False prok1
XM_043246423.1 mRNA upstream 65089 12078239 ~ 12083038 (-) True rbm15
XM_043246535.1 mRNA upstream 72769 12085919 ~ 12091662 (-) True alx3
XM_043246457.1 mRNA upstream 136837 12149987 ~ 12168140 (-) True kcnc4
XM_043246451.1 mRNA upstream 155737 12168887 ~ 12171370 (-) True hspa1b
unassigned_transcript_1295 other downstream 213286 11797130 ~ 11797202 (-) True trnaf-gaa_1
TU93692 other downstream 231237 11778271 ~ 11779251 (-) True G63274
TU93421 other downstream 446083 11562278 ~ 11564405 (-) False G63095
TU93842 other upstream 250544 12263694 ~ 12264533 (-) True G63385
XR_006251575.1 other upstream 338096 12351246 ~ 12363095 (-) False kcnq2a
TU94636 other upstream 1796278 13809428 ~ 13863250 (-) True G63933
XR_006251614.1 other upstream 2711058 14724208 ~ 14731391 (-) False slc20a1a
TU95023 other upstream 2766381 14779531 ~ 14781710 (-) True G64228

Expression Profile