RNA id: XM_043246577.1



Basic Information


Item Value
RNA id XM_043246577.1
length 753
RNA type mRNA
GC content 0.44
exon number 6
gene id zgc:195245
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 11838293 ~ 11840601 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATCTGGAATGGCGTAATGAGCTTGAACGTAATGTCTGCAACGAGCATCACTGAACATAAACAGCAGACGCTGAGTGAAGGCCACAGTCCTCACACTACTCGCACGATGCTGGACCTCAACACGACGAAAAAGCAGTCATCTGTATGCGTGGAGCGGCCAGGATTCAGACATCACAGAAAAGAGAATTTTGCGTGTAATTCTCCTGTGTCCCAGCAAAGCACAGACAGTGGAGATGAGTTCATTCAGCTCAGGAAACTGAATGGCTCACCCAGCGAGTGTCCCAGTCGCCAGAATCTCCATAAAGAGCTTCTGCTTGGCCACAAGAGGGGTCTGTTGTTGGAGGAGAAACCAGAATTGCAGCGCGTGTTACAGCAAAGGAGGCTTGACCTGCACCGAGAGGAGGAACTTGCCCTCCGACCTCCTTCTGACCTGGAACAAGAGCTCCGTAAAAGACAGCAGAAACTGCAAGAGTATGAGATGGAGGAACAGAGACGCATAGAGGATGAGAAGAATGTTCCAGAATTTGTACGAGTGAAAGAAAATCTGCGTCGCATACAGTTGACCGACTAAAACGACAAAGGACCTATGGAGAGGAATTGCGCCttgtaatttttactgttttcatataattaaaaagaatgttGAAAATAAGTTGCATACAGCAATAATGTAGTTTAGTAATGAAGCGCTctttaaatatactgaaatgttCTGTAAATGTGAGAATTAAAGCTATTAATGTCTTGTATAATA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93660 lncRNA downstream 15049 11821284 ~ 11823244 (-) True G63254
TU93661 lncRNA downstream 15049 11821284 ~ 11823244 (-) False G63254
TU93477 lncRNA downstream 170813 11667166 ~ 11667480 (-) True G63134
TU93470 lncRNA downstream 173519 11663435 ~ 11664774 (-) True G63127
TU93463 lncRNA downstream 186389 11648509 ~ 11651904 (-) True G63120
TU93738 lncRNA upstream 15144 11855745 ~ 11856062 (-) True G63304
TU93792 lncRNA upstream 176125 12016726 ~ 12017351 (-) True G63344
TU93795 lncRNA upstream 179110 12019711 ~ 12019953 (-) True G63347
TU93798 lncRNA upstream 181914 12022515 ~ 12022753 (-) True G63350
TU93778 lncRNA upstream 210756 12051357 ~ 12052979 (-) True prok1
XM_043246461.1 mRNA downstream 903 11828122 ~ 11837390 (-) False inavaa
XM_043246460.1 mRNA downstream 903 11828122 ~ 11837390 (-) False inavaa
XM_043246459.1 mRNA downstream 903 11828122 ~ 11837390 (-) True inavaa
XM_043246512.1 mRNA downstream 36639 11797768 ~ 11801654 (-) False LOC122350200
XM_043246510.1 mRNA downstream 36640 11797768 ~ 11801653 (-) False LOC122350200
XM_043246582.1 mRNA upstream 580 11841181 ~ 11842852 (-) True c8h1orf194
XM_043246571.1 mRNA upstream 43137 11883738 ~ 11891283 (-) False lhfpl5b
XM_043246570.1 mRNA upstream 43137 11883738 ~ 11885505 (-) True lhfpl5b
XM_043246465.1 mRNA upstream 130140 11970741 ~ 11974829 (-) True dclre1b
XM_043246540.1 mRNA upstream 136599 11977200 ~ 11983309 (-) True adora1b
unassigned_transcript_1295 other downstream 41091 11797130 ~ 11797202 (-) True trnaf-gaa_1
TU93692 other downstream 59042 11778271 ~ 11779251 (-) True G63274
TU93421 other downstream 273888 11562278 ~ 11564405 (-) False G63095
TU93842 other upstream 423093 12263694 ~ 12264533 (-) True G63385
XR_006251575.1 other upstream 510645 12351246 ~ 12363095 (-) False kcnq2a
TU94636 other upstream 1968827 13809428 ~ 13863250 (-) True G63933
XR_006251614.1 other upstream 2883607 14724208 ~ 14731391 (-) False slc20a1a
TU95023 other upstream 2938930 14779531 ~ 14781710 (-) True G64228

Expression Profile