RNA id: XM_043246755.1



Basic Information


Item Value
RNA id XM_043246755.1
length 1220
RNA type mRNA
GC content 0.54
exon number 3
gene id gp1bb
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 2865388 ~ 2868756 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCCACTTCCTGTCACATACTGCTCCAAGGAGGCGGAGTTTGTGTTTTATCAGCGCGGCCCAGCTGTGTTTGATGCTCCTTCAGACTGATActgactcacagacacactgcCGACGCTGATAAGCATAAACATCTCTGTTCAGCAGCTGCTCCGTATATGGAGACAACAAATATCCGGCACTGAAAACCTCTTTTCAGTGAGAGCGGGAGCCTGATCTGTGGTCCGtctgcagcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctggcaTGCGGTGGTGCGCTGCACTCGTGCTGAAGGTGCTGCTGTGGGTGCTGGTCAGTGAGATGGCCGCGGCTCAGGTCTGGTGTCCGGAGATGTGCTCCTGCTCGGACGCTGTGGTGGACTGCAGCAAACGCGGCCTCACCACGGCCAGCCTGCCCTCGTCCTTCCCTCCACACACCATCGCTCTCCAGCTCAACGACAACCACCTGACCGCTCTGCCCCCCGGCCTGCTGGACTCACTGCCCTCCCTGCGCCGGGTCGCTCTCCACGGAAACCCCTGGTCATGTGACTGCGGCGTCCTTTATCTGAGAGGATGGCTGCTGAAACAGAGCAACCCCGCTTCCATACAGAACGTCAGCTGCAGTTCTCCTGCTCGCCTGCGGGGGCGCCTGCTCGTGTTTCTGTCCGAGCGGGAGCTGCTGGAGTCGTGTCGTTACTGGCTGTGTAACCTGGCCCTGGCCTCTCAGGTCAGCCTCTTCGTCTTCGTCGCCGTGCAGGTGGTCCTGCTGGCCTCTGTCGTCCTCTTCCTCCGGCGCTTCGAGCTGCTCAGCCGAGAGGCGCGACGCACGGCGGCGGAGAGCTTCACCGCGGAGGACGACGCGACGCAGAGCGACGAGTACGTCCCGTTAAAGGACAGGAGCCTCTAGGGGCCGGAGCGAAACTGACAAATGCGTTCGGTTTCATTGTAATTATCGCGCACGGTGCAGTTTTGTTTATCGtattaaaatgtcctttttaatTGCGTGCATTTGCAAGGCATTTAGacaacaaaatataatgttaactgtaaaaatctaaattaattttttttatactttcttTGTAAAACGTGACTCATACGGCcacaacaaattaaacaattttagtGCATATTCACGTGTGCATGTctatgtgtttttgtcattttttgcttcaataaaataaaaagcaaaattgttgttattattcttaa

Function


GO: NA

KEGG:

id description
K06262 GP1BB, CD42c; platelet glycoprotein Ib beta chain

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU89694 lncRNA downstream 52210 2804304 ~ 2813178 (-) False rad9b
TU89699 lncRNA downstream 52281 2804304 ~ 2813107 (-) False rad9b
TU89695 lncRNA downstream 57889 2782620 ~ 2807499 (-) False rad9b
TU89696 lncRNA downstream 57889 2804304 ~ 2807499 (-) False rad9b
TU89697 lncRNA downstream 57889 2804304 ~ 2807499 (-) False rad9b
TU89738 lncRNA upstream 70524 2939280 ~ 2940478 (-) True G60638
TU89741 lncRNA upstream 74961 2943717 ~ 2944007 (-) True G60640
TU89740 lncRNA upstream 76654 2945410 ~ 2945931 (-) True G60639
TU89845 lncRNA upstream 692253 3561009 ~ 3561418 (-) True G60719
TU89846 lncRNA upstream 693836 3562592 ~ 3563073 (-) True G60720
XM_043247667.1 mRNA downstream 460 2847938 ~ 2864928 (-) True dhx37
XM_043247195.1 mRNA downstream 20672 2826476 ~ 2844716 (-) True si:ch211-166a6.5
XM_043247823.1 mRNA downstream 41562 2812953 ~ 2823826 (-) True rad9b
XM_043247825.1 mRNA downstream 41563 2812953 ~ 2823825 (-) False rad9b
XM_043247822.1 mRNA downstream 49349 2650970 ~ 2816039 (-) False cux2b
XM_043246752.1 mRNA upstream 857 2869613 ~ 2883339 (-) False sept5a
XM_043246751.1 mRNA upstream 857 2869613 ~ 2883278 (-) True sept5a
XM_043246753.1 mRNA upstream 15588 2884344 ~ 2911861 (-) True zgc:63587
XM_043246257.1 mRNA upstream 52957 2921713 ~ 2929935 (-) True cdc45
XM_043247469.1 mRNA upstream 65289 2934045 ~ 2938344 (-) True ciao1
TU89698 other downstream 52281 2794134 ~ 2813107 (-) False rad9b
XR_006251678.1 other downstream 313202 2523816 ~ 2552186 (-) False bicdl1
TU89626 other downstream 401017 2460931 ~ 2464371 (-) True G60564
TU89500 other downstream 803907 2059394 ~ 2061481 (-) True c8h22orf39
TU89498 other downstream 804053 2059394 ~ 2061335 (-) False c8h22orf39
TU89795 other upstream 163711 3032467 ~ 3035092 (-) True G60679
XR_006251616.1 other upstream 976697 3845453 ~ 3850590 (-) False lhfpl4b
TU90264 other upstream 1219968 4088724 ~ 4092157 (-) True G60967
TU90343 other upstream 1432236 4300992 ~ 4307499 (-) True G61023
TU90417 other upstream 1524457 4393213 ~ 4397074 (-) True G61071

Expression Profile