RNA id: XM_043246848.1


Basic Information

Item Value
RNA id XM_043246848.1
length 1567
RNA type mRNA
GC content 0.50
exon number 9
gene id vdac3
representative False

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1996550 ~ 2008100 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAAATAGAAGGCTGCAGATTGCGCATGCGCGCTCCGCGTCTGTTCTCCTTCAGCCTGTCCTTTCGCGCTGTGCAGAAACTCCGTCAGGAACACCGACACGGCAAACACGcAAACATGTCCGTCCCTCCTGCGTACGCTGACCTCGGCAAATCTGCCAAAGACATCTTCAGCAAAGGATACGGCTTTGGAGCTGTAAAGTTGGACCTGAAGACCAAGTCTCAGAGTGGAGTTGAGTTCTCCTCCGGCGGCTCCAGTAACACAGACACCGGAAAAGCGGCTGGAAACCTGGAGACCAAGTACAAAGTGAAGGATCTGGGCTTGACTTTGAACCAGAAGTGGAACACAGATAATGTTCTGACCACTGAAGTGACTCTGGAAGATCAGCTGGCCAAAGGTCTGAAGCTGGGACTGGACACGTCATTCGTGCCCAACACTGGGAAGAAGAGCGGTAAGCTGAAGACGGGCTATAAGCGTGAATACATGAACGTGGGCTGTGATATAGACTTCGATCTGGCCGGACCCACGATCCACGCCGCAGCCGTCCTGGGTTACGAGGGCTGGCTGGCCGGGTATCAGATGGCCTTCGACACGGCCAAGTCTAAACTGGCCCAGAACAACTTCGCTTTGGGCTACAAGGCAGGAGACTTCCAGCTACACACCAATGTTAATGATGGCACGGAGTTCGGCGGCTCCATCTATCAGAAGGTGAACGATCAGTTGGAGACGGCGGTCAATCTGGCCTGGACCGCAGGGAGCAACAACACGCGCTTCGGCATCGCTGCCAAATACCAGCTCGATAAAGACTCTTCCATCTCCGCCAAAGTCAACAACGCTAGTCTGGTTGGAGTAGGATACACGCAGAGCCTCCGGCCAGGTGTGAAGCTCACTCTGTCCGCTCTGATCGATGCTAAGAACTTCAACGCCGGAGGACACAAGGTGGGCATGGGCTTCGAGCTGGAGGTGTAACGACACGCAGAGCAGAGACGCACTGACAGGAAGTAAAGAAACACGGGGAGCTGACGGCTGACTTCGGCCCCTGCGGAAACACGTCGCCCTTGACCCCCATGATTCCTCCTAAACTAATCTGGCCTTAAACCCCCCGTAGAACCAATAAGAAACAGGATCAGCAGTCACATGATTCCTGTCCACACCGATCCTCCATCACCAGCTCACTATTCGACCACAGCTTCCTATTGGTCAACGTACAGCGCTTTTAATGTGACACACGTGGCACCatatcatttcctttttttttttcatttttaaactagATAATGTAGTTTCTGGTTTGTGAGCGGTCACACAGGACCTGACGTGTACGTTGTGCTTTTAGTTCACGCGTTTAATGTTGAATCAGAAACGTATCTCTGGATGTCGAGTCCCTCACGTTCATTGCCAAATGCGTAATATTTTATCACGGGTttgttgtctgtgtttgtggGCTGAAATTTTTAGAGGaaggtctttttttgtttttattcccataaaaaaagtgatttatgttCAGCGGAGGAACAGAAGAAGAAACTGATGTTGTGGAACTCAATAAAGAAGAATGTTGACTGAA

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0031101 fin regeneration biological_process
GO:0044070 regulation of anion transport biological_process
GO:0005741 mitochondrial outer membrane cellular_component
GO:0008308 voltage-gated anion channel activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU89472 lncRNA downstream 1805 1991335 ~ 1994745 (-) True G60473
TU89471 lncRNA downstream 3452 1991335 ~ 1993098 (-) False G60473
TU89469 lncRNA downstream 7997 1987773 ~ 1988553 (-) True G60471
TU89115 lncRNA downstream 146617 1849488 ~ 1849933 (-) True G60237
TU89073 lncRNA downstream 216197 1726225 ~ 1780353 (-) True G60204
TU89490 lncRNA upstream 29602 2037700 ~ 2039825 (-) True G60487
TU89547 lncRNA upstream 115960 2124058 ~ 2124341 (-) True G60510
TU89530 lncRNA upstream 123271 2131369 ~ 2156393 (-) False LOC122351111
TU89537 lncRNA upstream 123288 2131386 ~ 2135058 (-) False LOC122351111
TU89523 lncRNA upstream 124192 2132290 ~ 2134865 (-) False LOC122351111
XM_043247054.1 mRNA downstream 31497 1947141 ~ 1965053 (-) False plat
XM_043247053.1 mRNA downstream 31497 1947141 ~ 1965053 (-) False plat
XM_043247056.1 mRNA downstream 34346 1947141 ~ 1962204 (-) True plat
XM_043247048.1 mRNA downstream 59678 1927729 ~ 1936872 (-) True si:dkeyp-117b11.1
XM_043246946.1 mRNA downstream 69828 1880738 ~ 1926722 (-) True cltcl1
XM_043247449.1 mRNA upstream 33456 2041554 ~ 2044605 (-) True rpl6
XM_043247564.1 mRNA upstream 38018 2046116 ~ 2055183 (-) True acaa2
XM_043247583.1 mRNA upstream 51489 2059587 ~ 2061466 (-) False c8h22orf39
XM_043247301.1 mRNA upstream 63791 2071889 ~ 2075596 (-) True seta
XM_043246169.1 mRNA upstream 68049 2076147 ~ 2081503 (-) True zdhhc12a
TU89063 other downstream 209497 1732864 ~ 1787053 (-) False pi4kab
TU89104 other downstream 241166 1749147 ~ 1755384 (-) False LOC122349998
TU89103 other downstream 242634 1749147 ~ 1753916 (-) True LOC122349998
TU89107 other downstream 245182 1749147 ~ 1751368 (-) False LOC122349998
TU89094 other downstream 391437 1601521 ~ 1605113 (-) False LOC122350657
TU89498 other upstream 51296 2059394 ~ 2061335 (-) False c8h22orf39
TU89500 other upstream 51296 2059394 ~ 2061481 (-) True c8h22orf39
TU89626 other upstream 452833 2460931 ~ 2464371 (-) True G60564
XR_006251678.1 other upstream 515718 2523816 ~ 2552186 (-) False bicdl1
TU89698 other upstream 786036 2794134 ~ 2813107 (-) False rad9b

Expression Profile