RNA id: XM_043247016.1


Basic Information

Item Value
RNA id XM_043247016.1
length 2130
RNA type mRNA
GC content 0.59
exon number 10
gene id fbxl17
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 362578 ~ 532388 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGAAACATTGTAGCAGCCTGACACTCAGCGAGCGCGCGTTCGCGGAGCGTTCGCCCCTGTTTGTGTTCCGCGCGGACGATGAGAGCGCGGGAAGGAGGCGCCGAGGGCCGCGTGAGCTGGTGAGGACCGGCGGGGGTTCGCCGTGACGGAGAGGCGCCGAGAATCATCTATATGGGCCATTTTCTCTCAAAAAATGGTCACGGCCTGAAGAAGAAATCACGGAAGCTGcgcaagaagaagaagaagaggaggaactgCTTCCTTCAGGGCCCCTGCATGCTGTGCTTCGTCGTGCGGGGCAGCAGCGGGAGCGTCGAGGACGATTGGCCCTTCGAGAGCGCGGCCGTGTCCAAACTCGCCGAGCGCTACGCGTCGCTGAACTCGCCCGAGGAGTGCGCCCGCTTCCTCCTCTCCCCGGGAGAGCTGGCCGTCTGGGAGGGCCAGGGTCGGAGTCTGCTCTCCAAGCTGATCGGGCCCCCGGCGCTGTTCCGCGCCGTCGTCCCCGACTATTCGGAAATGGTGTGCAAGCGCAAGTGTGCTGAGCTGCAGCGGTGCACTCCCCGCAAGCAGCCCCGCTGTGCCTTCCAGGAGGCCATGGAGAACGGAGAGGAGCGGGGGGACGGACGCCGCCTGCTGCCTTCGCTGCCTtcgtcctcctcttcctctccgtCGGAGGAGGACGGCGGCTCCGGCGCGGACGGCCCCTCCGCCTCTtcgtcctcgtcctcctcctcctgctgctgTCAGCCGGCTCAGAACGAGAGCTCGGAGGAGACGAGGAGCGCCGAAAACACGGACACGTCCCACGCTAACCAGCTGCCCTCCTCTATACTGCTCAAGGTGTTTTCTCACCTGTCGGTGAAGGAGCGGTGTCTGGGAGCGTCTCTGGTCTGTAAATACTGGCGCGATCTCTGCTTAGACTTCCAGTTCTGGAAACAGATCGATCTCAGCGGCCTCCAGCAGGTCAAGGATGATCTGCTGGTGAAGATCGCGTCCCGGAGGCAGAACGTGACCGAGATCAACATCTCGGACTGCCGTAACGTTCAGGATCACGGCGTTTGCTCTCTGGCCTCCAACTGTCCGGGTCTGATCAAATACACGGCGTACCGCTGCAAGCAGCTGAGCGACGTGTCCCTGAGCACCGTGGCCGTCCACTGCCCGCTGCTGCAGAAACTTCACGTCGGCAATCAGGACAAACTCACTGACCACGCTCTCAAACTGTTGGGCGAACACTGCAGAGAGCTGAAGGACGTTCATTTCGGGCAGTGCTACAGCATCAGCGACGAGGGTCTAGTGGCGCTGGCTCAGGGCTGCAGCAAACTACAGAGGATCTACATGCAGGAGAACAAACTGgTGACTGATCGGTCCGTGCAGGCGTTTGCCGAGAGCTGTCCGGATCTTCAGTTCGTGGGCTTCATGGGCTGCTCGGTGACGTCTCAGGGCGTCATCCACCTGACCCGGctGCAGCACCTGAGCAGTCTGGACCTGCGGCACATCTCTGAGCTCAACAACGAGACCGTGATGGAGGTGGTGAGGAAGTGCAGGAACCTGACGTCACTCAACCTCTGCCTCAACTGGACCATCAAcgacagATGTGTGGAGATCATCGCTAAGGAGGGTCGGAGTCTGAAGGAGCTCTATCTGGTGTCCTGCAAGATCACCGATCACGCTCTGATCTCCATCGGTCAGTACAGCAGCACCATCGAGACGGTGGACGCCGGCTGGTGTAAGGAGATCACGGATCAGGGGGCTACGCAGATCGCCCGGAGCAGCAAGTCTCTGCGCTACCTGGGTCTGATGCGCTGTGACAAGGTGAACGAGGAGACGGTGGAGAGACTGGTGCTGCAGTATCCACACATTGTGTTCAGTACGGTGATGCAGGACTGTAAGAGAACGCTGGAACGAGCCTATCAGATGGGCTGGAGCCCCAACACATCCACGGCctcctaacacacacacacacacacacacagaatcatTATCATTACTATGCCGTTTATTCCGCCTTCCAACATTATGCAGCAGAAACGTCAATATTGTTTGATTCGAGCACACATATgtccatgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca

Function

GO: NA

KEGG:

id description
K10283 FBXL17; F-box and leucine-rich repeat protein 17

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU88237 lncRNA downstream 125921 236074 ~ 236657 (-) True G59688
TU88239 lncRNA downstream 125921 236074 ~ 236657 (-) False G59688
TU88197 lncRNA downstream 278725 83574 ~ 83853 (-) True G59654
TU88322 lncRNA upstream 13545 545919 ~ 547911 (-) True G59750
TU88788 lncRNA upstream 82907 615281 ~ 617472 (-) True G60016
TU88829 lncRNA upstream 128061 660435 ~ 661098 (-) True G60036
TU88765 lncRNA upstream 190816 723190 ~ 725000 (-) True G60003
TU88767 lncRNA upstream 192890 725264 ~ 727029 (-) False LOC122349987
XM_043247900.1 mRNA downstream 67308 202147 ~ 295270 (-) False efna5b
XM_043247899.1 mRNA downstream 67308 202147 ~ 295270 (-) True efna5b
XM_043247290.1 mRNA downstream 292378 5955 ~ 70200 (-) False LOC122350625
XM_043247284.1 mRNA downstream 316415 7 ~ 46163 (-) False LOC122350625
XM_043247950.1 mRNA upstream 25882 558256 ~ 563214 (-) True slc35d2
XM_043247734.1 mRNA upstream 36212 568586 ~ 570967 (-) False ccl27a
XM_043247522.1 mRNA upstream 40209 572583 ~ 576178 (-) True LOC122350794
XM_043246779.1 mRNA upstream 48655 581029 ~ 586701 (-) False ubox5
XM_043246782.1 mRNA upstream 48655 581029 ~ 586646 (-) False ubox5
TU88755 other upstream 33512 565886 ~ 570973 (-) True ccl27a
TU88852 other upstream 194815 727189 ~ 731620 (-) False LOC122349987
TU88902 other upstream 603027 1135401 ~ 1138152 (-) True G60098
XR_006251689.1 other upstream 608324 1140698 ~ 1159246 (-) True commd10
TU89022 other upstream 819536 1351910 ~ 1356931 (-) False LOC122350266

Expression Profile