RNA id: XM_043247261.1


Basic Information

Item Value
RNA id XM_043247261.1
length 3310
RNA type mRNA
GC content 0.53
exon number 22
gene id kansl3
representative False

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 21923712 ~ 21943417 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CAGTCCGCGTTTTCCGTTGATCCGCTGTGGCGCGGCAGTAAAACAAAAGATAGTCGGCCATAGCTGAACCTTCACTATAGTGGATATTATTTTGTCGGAGTTTACTGTTTTCTCATCGCATGAACTCGATTTCCTCAGTACTGTATACAGTAACCAGAAGACCGTTCTTTGGACCGAAATGACATGAAAGGAGCCTGATACTGGACAGGTTGATGTTTACGCTGCAAGAGTCCCATTTTCGCGGGAACCGCAGAGCTTCGGTGCGGGGCTAGAGGACCATGTTCCGTTCCGGAGGGGAGAGAGACTTCCAGACGTCGGCTCGAAGGATGGGAACGTCCCTGCTCTTCCAGCTGTCGGTTCATGAGCGAGAGTTGGACCTGGTGTTTCTCGACCACAGCTATGCCAAACCCTGGAACGCCCACCCGGATGCCAGCAGCGCGCGGCCCACCCACATGCTGTTCGTCACCCCGCGCCGGCAGCCGGAGCCTTCTGTCGATTCGGACGTTTCCATCGACGTGGAGACGGTCACACCCACTCCGATGCCTCTCTACGACAACCAGAAAGCCCGCAGTGTGATGAACGAGTGTGAACGCCACGTTCTGTTTGCCAGAACCATCGCTGATGGACCGCCTCCTCCCGATGATTGGGAAGAACACATCAACAAGGCTGGCTGGTCATTGGCTCAGAACAAGCTCTTCAACAAAGTATTAAAAGCGCTGCAGGCTGAAAGACTCAGCAGACTGGCCAATGAGGGTGCCTGTAATGAACCTGTCTTACGCAGGATAGCGGTAGATAAATGTGCTCTTAAGATCCGCCACGCTCTGGCCAGCATCAACTGGGACATAAAGCTGACACACTGGCTTCACAGCACACTGGTGGAGTCTTTGAGTCTTGCTATGCTGGCGGCTTACCTTGACGTACTGCAGACACTCAAAAGCAAGGTACCATCCCTGATCGACAGGATGTTGCTGTCATCCTCTGTGAAAACAGGAGCAGCCGGAGCTGAGGCTCTTTCTCTGCTTCTAAAGCGGCCATGGGACCCCGCTGTAGGTGTGCTGTCACACAACAAACCAAGTAAACTTCCTGGATCCCCCCTGATTTTGATGGCTCCATCAGGACCAACAAACCCAGCCTTCTTAGCCTCTCGACGAATGAGATTCTGGCAATCTCAGCTCTCCTGTCTCGGGAAGGTCATTCCCATTAACGTTCATGTGGGCAGTGGAGCCAACGTCGGAATCACGCAGTGTTTAGAGCACATGATCGGCACAGTCAGAGGAAAAGTTATTGAGGTTCACAGTCACTTTCCACACAAGCCGATCATCTTGGTGGGCTGGAATGTGGGCTCGTTGATCTCGTGTCATGTGTCCCTTATGGAGTACGTGACTGCTGTTGTGTGTTTGGGCTTCCCTCTTCAAACCGTCAGTGGCCCCCGAGGGGATGTTGATGACCCTCTGTTGGACATGAAGACTCCTGTGCTGTTTGTGGTGGGTCAGAACGCGCTTCAGTGCAGTCCTGAGAACATGGAGGAGTTCAGGGAGAAGATTCAGGCTGATAACAGCATGGTCGTTGTCGGGGGGTCAGACGACAACCTGAGGATCAACTCCACTAAGATGAAGACAGAAGGTCTGACGCAGACCATGGTGGATCGCTGCATTCAAGATGAGATAGTCGATTTTCTGACAGGAGTTTTGACCCGTACTGAGAGCCATGGCCACGGCTCTGGTGAAACTCGAGATTTGGAtgcagagaagaagaagaaaccaCGTCGTGAGCTGCCCTTTGACCTTGAGAGGTCACGACCCTCTTCACCTGCTGTGAGGGTACCCATATCCCCGTCTGGGTCAGAGGATATGTCCAGTGTCTGCAGCAGTCCTACAGCCAGTCCCAAACCCAAGATGGTTGGGCTTTCTCCAGCTCAGAAATCCAGTCTCATTACTGCCACGCAGCTGCTGAAGACCCACATGCAGCGCTCAGGAACTGTGCTCACGCACAAGCAAGCTCAAGCTCAGTTCGCTGCTTTTATGAAACATAATATGCTGGTGAGGAAAAGCATTCCTCCTGGCAGCCCATCATGTCTCTTTGTGCCGGTGCCCAGTGAGCAGATGGAGGGTTTGGACCGAGACGACCTGAGGGTCCATCTCAAGAGAAGACAAACACCCAGTCCTACTCCTACCAAAGCCTCGAAAAGAGCCAAGATCAAAGTCACCATCGTCTCCCACGGTGACGCGGCGGGAAACACGGCTGGATCCACTTCTCAAGAAATGGGTTTGTCAGGAAAGCCTCTTGGACTGACGGTGGGTCAGACGGTATCGGGGGCCAAAGAGCTGTCGGAGCTTCTCAGTGCACAAAGGTCAGGTTTGGCAGACGTGTCCAGTGAAGGGCCGTTTCACAGCCTGCAGGGGAGTGTGATGTCCGGTTCTTCCTCTCCTGTCCAAGCTCAGGCCCCGTCCACCGCACAAGCTCCCTCTGCCAGTAGCCTGCTGCAGGGCCTGAGCCTCAGTCTGCAGGAGATCAACACTAAATCCCCAGGCCTCTCCTCCACCACACAGGTGTCCGGGGGGAAGCCGCAGTGTCAGGGGCAGGTGTTGGGCAGCGGCGGCACACTCGTGCGGACCGTCCCGGTCGTGTCGACAGGATCCGGGATGACCAAAACCACCGCCATCCACCAGCTCCTCACCAACGGAGGCCTGGCCAAGCTAGCCAATAGCCTGCCGGGACTGGCCCACGTCTCCAGTCAGAGCACGGGACTAAAAGCTCCCACCACGATCACGGTGACCCTGCGCGGGCAGCCCAGCAGAATTCCCGCCCTCGGCCACACGGGGGCGCCGGCGCCCGCGCCGCTCACAGCGCACCAGAGCAGCAGTGACCAGAAACTCTGAAATGGACGATACGAAGCCGAAATGGACGCCATTCATTCTTCAAATGAGCATCCAGTTGAACCGAGAGGAATCAAATGCAGAAACCCGGGCTGAAAACTAAAAGGCCTGCTGATTTTCCTGCAAGAGCGCCATCTATAGACACTTTCTTGCACACATGGACTGAAAACCTTATTCTGTTACACTCTGGCTGTACAGCATCGCGGGCAATTCTTTATGCGAACGAACGTCTTTATCGAAAAATACATTGTCTTTATTCTTAAGTTATTATTTCCTAAAAACGTTTCGCCAGTATAACATGCTTAGGTTTGCTTGATAGAGCTGTTTTTGCACAGCCTGTGCTTTATTACCTCACAGCCACAAAGAGCCTGAGAAAAAATGGATCATTAAACTGTCAAAATACTGCTAATAAATTCAAGGCGTTTAAAAGACGA

Function

GO:

id name namespace
GO:0043981 histone H4-K5 acetylation biological_process
GO:0043982 histone H4-K8 acetylation biological_process
GO:0043984 histone H4-K16 acetylation biological_process
GO:0000123 histone acetyltransferase complex cellular_component
GO:0046972 histone acetyltransferase activity (H4-K16 specific) molecular_function
GO:0043995 histone acetyltransferase activity (H4-K5 specific) molecular_function
GO:0043996 histone acetyltransferase activity (H4-K8 specific) molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU97735 lncRNA downstream 170097 21751768 ~ 21753615 (-) True G66071
TU97707 lncRNA downstream 279029 21571117 ~ 21644683 (-) True G66046
TU97708 lncRNA downstream 285364 21603675 ~ 21638348 (-) True G66047
TU97710 lncRNA downstream 285364 21631309 ~ 21638348 (-) False G66047
TU97458 lncRNA downstream 549121 21373243 ~ 21374591 (-) True G65871
TU97789 lncRNA upstream 67226 22010643 ~ 22013678 (-) True G66115
TU97806 lncRNA upstream 121481 22064898 ~ 22068757 (-) True LOC122350973
TU97807 lncRNA upstream 121481 22064898 ~ 22068757 (-) False LOC122350973
XR_006251666.1 lncRNA upstream 130270 22073687 ~ 22074471 (-) True LOC122350974
TU97817 lncRNA upstream 350022 22293439 ~ 22295953 (-) True G66131
XM_043246270.1 mRNA downstream 4034 21855648 ~ 21919678 (-) True bmp1a
XM_043247493.1 mRNA downstream 158207 21757675 ~ 21765505 (-) True rab7b
XM_043247487.1 mRNA downstream 172032 21730654 ~ 21751680 (-) False prkg1l
XM_043247486.1 mRNA downstream 172032 21730654 ~ 21751680 (-) True prkg1l
XM_043247488.1 mRNA downstream 172032 21733114 ~ 21751680 (-) False prkg1l
XM_043247797.1 mRNA upstream 96654 22040071 ~ 22054375 (-) True LOC122350992
XM_043247763.1 mRNA upstream 116598 22060015 ~ 22067329 (-) False LOC122350973
XM_043246221.1 mRNA upstream 131593 22075010 ~ 22110087 (-) True antxr1a
XM_043246010.1 mRNA upstream 202106 22145523 ~ 22146997 (-) True LOC122349886
XM_043245990.1 mRNA upstream 216569 22159986 ~ 22161558 (-) True LOC122349876
TU97752 other downstream 147092 21771468 ~ 21776620 (-) True G66086
XR_006251697.1 other downstream 1470581 20453031 ~ 20453131 (-) True LOC122351134
TU96506 other downstream 2490577 19428746 ~ 19433135 (-) False si:ch211-218o21.4
TU96509 other downstream 2490577 19428746 ~ 19433135 (-) True si:ch211-218o21.4
XR_006251696.1 other downstream 2721335 19202277 ~ 19202377 (-) True LOC122351133
TU97796 other upstream 70556 22013973 ~ 22025791 (-) True G66119
TU97791 other upstream 85315 22028732 ~ 22031993 (-) True G66116
TU97805 other upstream 121481 22064898 ~ 22068757 (-) False LOC122350973
TU97809 other upstream 136034 22079451 ~ 22097808 (-) False antxr1a
TU97810 other upstream 138604 22082021 ~ 22096062 (-) False antxr1a

Expression Profile