RNA id: XM_043247448.1


Basic Information

Item Value
RNA id XM_043247448.1
length 2565
RNA type mRNA
GC content 0.49
exon number 10
gene id ppp2r2aa
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 3081886 ~ 3091387 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTGTCTGGCGTCGTGCGTGAGTTGTGACGTCAGCGGAGCACGCACGTTCAGCGCGTGTgatgatagaatgatagaaaaGCTAAACACGCTTCTGTTCGGAGGGAATTATGAAATCAAACCGTATTCCAGCGCTTTGTTAAGAAAACGAACCGTGtctcattaaaatatctttatgaaATAACAGAGTTAGAGGAAACGACGCTCGAAACCAACATCGAAAAATAAGGCCCAGGACTGAATCAGATCCAGCCCAGCATGGACGGAGATGGAGACGGCCAGAGCCGCTGGTGTCTGTCCCAGGTCAAAGGAGCCGTGGATGATGATGTAGCCGAAGCTGACATCATCTCCGCGGTGGAGTTCAATCATTCCGGGGAGCTTTTGGCCACAGGAGATCGAGGCGGAAGAATAGTGATCTTCCAGCAAGAGCAAGAGAGCAAGAACTTGCCGCAGTGCCGCGCCGAATATAACGTCTACAGCACGTTCCAGAGTCACGAGCCGGAGTTCGACTATCTGAAGAGCCTGGAAATCGAGGAAAAGATCAACAAGATCCGCTGGCTTCCTCAGAAAAATGCTGCACACTTCCTGTTGTCCACAAACGATAAAACCATCAAGCTCTGGAAAATCAGTGAACGAGACAAGAGACCGGAGGGATATAACCTCAAAGAAGAGGACGGCCGCTTCAGGCATCCGTCGTCCCTCACAACACTACGGGTTCCGGTGTTCCAGCCGATGGATCTGATGGTGGAGGCGAGTCCGCGGCGGGTTTACGCCAACGCTCACACCTACCACATCAACTCCATCTCCGTCAACAGCGACAACGAGACGTACCTGTCCGCTGATGACCTCCGGATCAATCTGTGGCACCTGGACTTCACCGACCGAAGCTTCAACATTGTTGACATCAAGCCGACCAACATGGAGGAGCTGACGGAGGTGATCACGGCCTCCGAGTTCCACCCGCTCCAGTGCAACACGTTCGTGTACGGCAGCAGCAAGGGCTCCGTGCGCCTGTGCGACATGAGGGCGTCCGCTCTGTGCGATCAGCACTCGAAACTGTTCGAGGAACCCGAGGATCCCAGCACGCGCTCCTTCTTCTCGGAAATCATCTCATCCATCTCGGACGTCAAGTTCAGTCACAGCGGCCGATACATGATGACCAGAGATTATCTGACCCTCAAGATCTGGGACCTGCACATGGAGAGTCAACCGGTGGAAACCTACCAGGTTCATGGTTATCTCAGGAGTAAGCTGTGCTCTCTCTACGAGAACGACTGCATCTTTGATAAGTTTGAGTGCTGCTGGAGGGGCGATGACAGCGAGGTCATGACGGGCTCTTATAACAACTTCTTCCGGATGTTCGATCGCGACGCCCAGCGCGACGTCACCCTGGAGGCCTCGTGGGAGAACGGCTCGCCCGGATGCCCGCTCAAGACCTGGCGCGTGTGCGCCGGGAGCCGGCGCAAGAGGAACGAGATCGGCGTCGACTGCCTGGACTTCAGCAGAAAGATCCTCTACACCTCCTGGCATCCTCAGGATAACATCGTGGCGCTGGCCACAGTCAATAACCTTTACATATTCCAGGAGAAACCCAATTAGGGATTCGGAAACGGCTTCAACCCCCCCCCCGTCCCTTGCTCCGAGAGTCGGACGGGAAGCACGCCAAGCACAACGTCTCTCCTGAAACTCATAGTCTTAATATTAACCACTGtagtacacaaaaaaaacctttgggtTATTCTATTACGTTAATTGATACACTGTAGGCCGGAGGAAGGGTTTTTagttgtattactgtattttgttttatttttattttgcacatcgTCCGTTTCAGCTTTAACCCGAAGCATCGGTCGTCGCTGGGTAATAAACACGCAACCAAACTGACCGAGCAGACCCGCAGAATCCTGTTTAATAAGTTTGCAGAATCGCATTTAATCGATTGGACTCCACACGCACCGATTGCTCCCTTCCGAACTCAGGCCTGGTGCAGCGGGACGTTTCCTTCACCAAACACTCGTCGAACGCCTGACATTCGTCCACAAAGTGCAATTGACTTAAGCAGGGTTCCCAAATAGCTCCATTATTCCCTACATTAAGTCCTTAATGGGTACAACTAATCGTGGCATTAATTTTATGCAATATCTTAGTCTTTGTGGATCGGGGAGACTTTTTAATCCGTCTCttttaatcgttttttttttttttttttagagagacacaCAAATGTTTCGAGTCTTAAGTAAAGGTTTGTGCATGTTCTATGATTTTCTGCATCTTTTGATGTGCGTCGTTTTATTTGCAGCTTTTTAATACAGAATGGTTGCTACGGGGTAAAGAATGCTctagatatttttatatgaattttcGAAATTGAAATTATGTCCTTGACAGTATTCAGTGTATTAATGCTGTTGATTGGTGCAGAATGATTCTGTATAATAGAGCGTGTTTACATGGAAATCAGGCCTGCTGTATATGAACAAACCCTGAAGTATGTTCCCTTTTATCTTAATAGTTGTACaacccaaaatgtaaaataaaaattaattttaagacTGAAAA

Function

GO: NA

KEGG:

id description
K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU89740 lncRNA downstream 135955 2945410 ~ 2945931 (-) True G60639
TU89741 lncRNA downstream 137879 2943717 ~ 2944007 (-) True G60640
TU89738 lncRNA downstream 141408 2939280 ~ 2940478 (-) True G60638
TU89699 lncRNA downstream 268779 2804304 ~ 2813107 (-) False rad9b
TU89697 lncRNA downstream 274387 2804304 ~ 2807499 (-) False rad9b
TU89845 lncRNA upstream 469622 3561009 ~ 3561418 (-) True G60719
TU89846 lncRNA upstream 471205 3562592 ~ 3563073 (-) True G60720
TU89847 lncRNA upstream 472145 3563532 ~ 3564937 (-) True G60721
TU89848 lncRNA upstream 476429 3567816 ~ 3569810 (-) True G60722
TU89855 lncRNA upstream 488174 3579561 ~ 3579961 (-) True G60729
XM_043246888.1 mRNA downstream 1144 3069501 ~ 3080742 (-) True bnip3la
XM_043247563.1 mRNA downstream 14545 3043181 ~ 3067341 (-) True dpysl2a
XM_043246025.1 mRNA downstream 83491 2993935 ~ 2998395 (-) True tmem230b
XM_043246024.1 mRNA downstream 83492 2993935 ~ 2998394 (-) False tmem230b
XM_043246710.1 mRNA downstream 88503 2952733 ~ 2993383 (-) True igsf9b
XM_043247896.1 mRNA upstream 117704 3209091 ~ 3376182 (-) False LOC122351051
XM_043247895.1 mRNA upstream 117704 3209091 ~ 3376164 (-) False LOC122351051
XM_043247897.1 mRNA upstream 120102 3211489 ~ 3314174 (-) False LOC122351051
XM_043247898.1 mRNA upstream 206307 3297694 ~ 3314174 (-) True LOC122351051
XM_043247732.1 mRNA upstream 491957 3583344 ~ 3636194 (-) True dock5
TU89795 other downstream 46794 3032467 ~ 3035092 (-) True G60679
TU89698 other downstream 268779 2794134 ~ 2813107 (-) False rad9b
XR_006251678.1 other downstream 529700 2523816 ~ 2552186 (-) False bicdl1
TU89626 other downstream 617515 2460931 ~ 2464371 (-) True G60564
TU89500 other downstream 1020405 2059394 ~ 2061481 (-) True c8h22orf39
XR_006251616.1 other upstream 754066 3845453 ~ 3850590 (-) False lhfpl4b
TU90264 other upstream 997337 4088724 ~ 4092157 (-) True G60967
TU90343 other upstream 1209605 4300992 ~ 4307499 (-) True G61023
TU90417 other upstream 1301826 4393213 ~ 4397074 (-) True G61071
TU90966 other upstream 2095928 5187315 ~ 5187916 (-) False LOC122350811

Expression Profile