RNA id: XM_043247533.1


Basic Information

Item Value
RNA id XM_043247533.1
length 524
RNA type mRNA
GC content 0.56
exon number 4
gene id fabp1b.1
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 630354 ~ 631145 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCCGCTCAGGTTAATGATTCCTCATCTGCGCCTTCGGCGGTATAAAGGCGTCTCTCCGGAGTCACTCTGCGTTCAGCGGTCAGCATGTCGTTCAGTGGGAAGTATCAGCTGGAGAGTCAGGAGGGCTTCGTGGAGTTCATGAAGGCCGTCGGTCTCCCCGACGATCTGATCGAGAAAGGCAAAGACATCAAGAGCGTGTCTGAGATCGAGCAGAACGGAGACCACTTCAAAGTGACCGTCACCACCGGAGCCAAGGTCCTGACCAACAGCTTCACCATCGGCCGGGAGAGCGACATCGAGACGCTGACCGGAGACAAAGTCAAGGCCGTCGTCAATAAAGACGGGAACAAGCTGATCGTCGTCCTGAACAAAGTGACGTCCGTCACGGAGCTGGTGGACGGGAACACGCTGGTCAACACGCTGACGCTGGGCGGCCTCGTCTACAAGAGGACCAGCAAACGGCTGGCCTGAACACCGCCGGGACTGAGCGTGCAGAAACAATCATtaaagatttctaaaaatca

Function

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005737 cytoplasm cellular_component
GO:0005504 fatty acid binding molecular_function
GO:0005215 transporter activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU88788 lncRNA downstream 12882 615281 ~ 617472 (-) True G60016
TU88300 lncRNA downstream 78472 514767 ~ 551882 (-) True G59739
TU88322 lncRNA downstream 82443 545919 ~ 547911 (-) True G59750
TU88237 lncRNA downstream 393697 236074 ~ 236657 (-) True G59688
TU88239 lncRNA downstream 393697 236074 ~ 236657 (-) False G59688
TU88829 lncRNA upstream 29290 660435 ~ 661098 (-) True G60036
TU88765 lncRNA upstream 92045 723190 ~ 725000 (-) True G60003
TU88767 lncRNA upstream 94119 725264 ~ 727029 (-) False LOC122349987
TU88853 lncRNA upstream 101695 732840 ~ 734242 (-) False csgalnact1b
TU88859 lncRNA upstream 124479 755624 ~ 756643 (-) True G60061
XM_043246783.1 mRNA downstream 19440 607450 ~ 610914 (-) True sprb
XM_043246776.1 mRNA downstream 28510 588798 ~ 601844 (-) True lzts3b
XM_043246779.1 mRNA downstream 43653 581029 ~ 586701 (-) False ubox5
XM_043246782.1 mRNA downstream 43708 581029 ~ 586646 (-) False ubox5
XM_043246781.1 mRNA downstream 43718 581029 ~ 586636 (-) True ubox5
XM_043246157.1 mRNA upstream 82221 713366 ~ 724970 (-) False rnf165b
XM_043246156.1 mRNA upstream 82221 713366 ~ 724970 (-) True rnf165b
XM_043246159.1 mRNA upstream 92000 723145 ~ 731844 (-) True LOC122349987
XM_043247330.1 mRNA upstream 101648 732793 ~ 739372 (-) True csgalnact1b
XM_043246162.1 mRNA upstream 112048 743193 ~ 747336 (-) False spinb
TU88755 other downstream 59381 565886 ~ 570973 (-) True ccl27a
TU88852 other upstream 96044 727189 ~ 731620 (-) False LOC122349987
TU88902 other upstream 504256 1135401 ~ 1138152 (-) True G60098
XR_006251689.1 other upstream 509553 1140698 ~ 1159246 (-) True commd10
TU89022 other upstream 720765 1351910 ~ 1356931 (-) False LOC122350266
TU89089 other upstream 945660 1576805 ~ 1578744 (-) True G60220

Expression Profile