RNA id: XM_043247584.1


Basic Information

Item Value
RNA id XM_043247584.1
length 1331
RNA type mRNA
GC content 0.50
exon number 4
gene id LOC122350843
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 2135208 ~ 2138080 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

attgtaTACGTCATGCAATCGCCTTATTAGGAGTttgtcatatattattattactctcGACTGTAACAATGATCTGCTGCAGAGCTGGAATCTGACACGTTGGTGTGTGTCATTATCACCAGCGCGTTAGCTGATGTGTTAGTTAGCGTTCAGACCCGTTCGCGGTGAACGTTCACGATGGTTCTCTCCGTTCTGAGCGTGGTTTGTTTGTCCCTGGGCCTCACAGCAGCGGAGCACGGCGGCTGTATTAAAGTCAACCGGTGTAAATGTCTGATGAGGGACGGTACCGGGATCATTGATTTGGGATCGGTACCGGGTCCGGACGGCTTCATCCAGCGACTCCATCCCCTGGCGTCAGACGTACTGCTGTCCTTCAGCCCGTGTCTGTCCTTCTCTCAGCCCGAGGAGCTCAGCATCACCGCCTGCACCGACGTGGCCGTCTGTGTCGTGATACGGACTCAGCAGGACGACGGCTTCGTCGAGCAGTACTTGAACTACGGCAGACACGAAGGCAACACATTCAGCTACAACGACTCCAAGAAAACCCTCACCGTGTCTTATTCCATGTTTCCAGGCAGCGAGCCTCGAACGGTGGTTCACTACCAGTGCGGTCCAAACCGCTCCGTCACACACAGCCAGAGCTTCAGGGCCGACGGGCCCCTGGAGATGTGGGTGGAGAGCCCCTGCGTGTGTCCGAACGCCTGCGCCCTGGTGGACGTGGGTCCCGGGACCATCTTCCTCATCATCCTCTGCCTCAGTGTGACGGCTTACTTCATTATAGGCTCCTGCGCGCTCCGGCCCTTCAGGACCGCTGACGGTGTTCGGATGGCTCCGGAGGACAGCGTTTGGTGCATGATCTGCTTCCAGCTCCGAGAGCGGTCCGAAGGCGGCAGGCGGAAGAGGAACTACTCTCTGACCGACACGCTGTGATCCCGCCGTTTCAGAGAAGAATGCATACGGGCGTTTAAAAGGATCTCCGCTTCAAAAAACCCATCTGCGAATcctgaagttaaaaatgtctttggcATCGATAACCGTTAAAAATGGTTCAGCCTAAAATcgggagtaatgatgctgaaaatgcagggaaaaatgacattttacaatatacaatcacacattacaataatgcactttttatcaattaagcatttattaatcttagctagtgcattattaaaatcgcaagttgtgtttgttaccGTGAGTTAACACTAGTGGTATTTTTATACTAGCTCATGTtgaaaaagatgaataaataccgtaataaatgtattgttcattacCTAATGACATCTCATTGTAAAGCAATAAATTCTATTTCTGTTCTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU89537 lncRNA downstream 150 2131386 ~ 2135058 (-) False LOC122351111
TU89523 lncRNA downstream 343 2132290 ~ 2134865 (-) False LOC122351111
TU89524 lncRNA downstream 343 2132290 ~ 2134865 (-) False LOC122351111
TU89547 lncRNA downstream 10867 2124058 ~ 2124341 (-) True G60510
TU89490 lncRNA downstream 95383 2037700 ~ 2039825 (-) True G60487
TU89527 lncRNA upstream 13621 2151701 ~ 2156393 (-) False LOC122351111
TU89531 lncRNA upstream 15534 2153614 ~ 2156393 (-) False LOC122351111
TU89557 lncRNA upstream 28852 2166932 ~ 2168247 (-) True G60519
TU89568 lncRNA upstream 111262 2249342 ~ 2253090 (-) True G60530
TU89570 lncRNA upstream 144458 2282538 ~ 2282891 (-) True G60532
XM_043246916.1 mRNA downstream 45915 2082041 ~ 2089293 (-) True slc25a25a
XM_043246169.1 mRNA downstream 53705 2076147 ~ 2081503 (-) True zdhhc12a
XM_043247301.1 mRNA downstream 59612 2071889 ~ 2075596 (-) True seta
XM_043247583.1 mRNA downstream 73742 2059587 ~ 2061466 (-) False c8h22orf39
XM_043247564.1 mRNA downstream 80025 2046116 ~ 2055183 (-) True acaa2
XM_043247988.1 mRNA upstream 16155 2154235 ~ 2162003 (-) False LOC122351111
XM_043247555.1 mRNA upstream 266130 2404210 ~ 2419714 (-) False LOC122350819
XM_043247554.1 mRNA upstream 266130 2404210 ~ 2406457 (-) False LOC122350819
XM_043247553.1 mRNA upstream 266130 2404210 ~ 2406439 (-) True LOC122350819
XM_043247551.1 mRNA upstream 270266 2408346 ~ 2410033 (-) True LOC122350817
TU89500 other downstream 73727 2059394 ~ 2061481 (-) True c8h22orf39
TU89498 other downstream 73873 2059394 ~ 2061335 (-) False c8h22orf39
TU89104 other downstream 379824 1749147 ~ 1755384 (-) False LOC122349998
TU89103 other downstream 381292 1749147 ~ 1753916 (-) True LOC122349998
TU89626 other upstream 322851 2460931 ~ 2464371 (-) True G60564
XR_006251678.1 other upstream 385736 2523816 ~ 2552186 (-) False bicdl1
TU89698 other upstream 656054 2794134 ~ 2813107 (-) False rad9b
TU89795 other upstream 894387 3032467 ~ 3035092 (-) True G60679
XR_006251616.1 other upstream 1707373 3845453 ~ 3850590 (-) False lhfpl4b

Expression Profile