RNA id: XM_043247691.1


Basic Information

Item Value
RNA id XM_043247691.1
length 833
RNA type mRNA
GC content 0.52
exon number 6
gene id crybb2
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 17697175 ~ 17699415 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGTGCCACCCCACAGCGACTGGCACATCCCGGAGCTGCTCATCACACCCATCCTGGTTCACTATGGCAACTGATCACCAGAACCCTGCAACCAAGCAAAAACAACCAGTTGCCAGTAACTTCAAGTTGGTCATTTACGAACAGGAAAACTTTCAAGGCCGCTGTCATGAGCTGACTGGGCCCTGTAACAACATCAAGGAGGCGGACGTGGCGAAAGTGGGCTCAATACTGGTGCTGTGTGGACCGTGGGTGGGATATGAGCAGCCCGGCTGTAAGGGGGAACAGTATGTGTTTGAGAAGGGTGAGTATCCTCGCTGGGACGCCTGGACCAACAGCAGACGCAGTGACTGCATCGTCGCCTTCCGCCCCATCAAAGTGGACAGCCAGGAACACAAGATCGTGCTCTATGAGAACCCAAGCTTCGCTGGGAAGAAGATTGAGATCATAGATGATGATGTTCCCAGCTTCCACGCTCATGGATACCATGAGAAAGTCTCTTCAGTTCGTGTGCAGAGTGGCACCTGGGTGGGCTATCAGTACCCAGGATACAGAGGCTTCCAGTACTTGTTTGAGAAAGGAGAGTTTAAGGAGTGTTCTGAGTTTGGGGCCGTGCTGCCTCATATCCAGTCCGTGAGGCGCATCCGTGACATGCAGTATCACCCAAGAGGGGCCTTCCAAGCCTCCACCTAAGTTCCCAGCGCTTCTCTTCAAACCCCAAAGCTTCTGAAACGCCCCTTCCTTTCCTTACTCTTCACCTTTGAATGCTTATCTTTGACTCTTTCAGTTGTGTCAGTGATTCCATTTGCTACtgctgagaaataaaaaaaaagtgat

Function

GO: NA

KEGG:

id description
K23482 CRYB; beta-crystallin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU95788 lncRNA downstream 32043 17661349 ~ 17665132 (-) False G64757
TU95787 lncRNA downstream 32043 17663705 ~ 17665132 (-) True G64757
XR_006251626.1 lncRNA downstream 36197 17657809 ~ 17660978 (-) False LOC122350842
XR_006251627.1 lncRNA downstream 36197 17659156 ~ 17660978 (-) False LOC122350842
TU95783 lncRNA downstream 36209 17658574 ~ 17660966 (-) True LOC122350842
TU95820 lncRNA upstream 46270 17745685 ~ 17745924 (-) True G64777
TU96043 lncRNA upstream 330120 18029535 ~ 18032726 (-) True G64942
XR_006251591.1 lncRNA upstream 396680 18096095 ~ 18103013 (-) True LOC122350292
TU96072 lncRNA upstream 426770 18126185 ~ 18128804 (-) True G64966
TU96110 lncRNA upstream 586070 18285485 ~ 18285734 (-) True G64992
XM_043247814.1 mRNA downstream 51664 17601258 ~ 17645511 (-) False kcnip3a
XM_043247813.1 mRNA downstream 51664 17601258 ~ 17645511 (-) False kcnip3a
XM_043247812.1 mRNA downstream 51664 17601258 ~ 17645511 (-) False kcnip3a
XM_043247819.1 mRNA downstream 74307 17601258 ~ 17622868 (-) False kcnip3a
XM_043247820.1 mRNA downstream 74308 17601258 ~ 17622867 (-) False kcnip3a
XM_043246232.1 mRNA upstream 2097 17701512 ~ 17706491 (-) True LOC122350049
XM_043246062.1 mRNA upstream 353944 18053359 ~ 18056277 (-) True si:dkey-63d15.12
XM_043246661.1 mRNA upstream 376182 18075597 ~ 18079483 (-) True asgrl1
XM_043246666.1 mRNA upstream 380530 18079945 ~ 18082578 (-) False si:ch211-170d8.8
XM_043246665.1 mRNA upstream 380531 18079946 ~ 18082617 (-) True si:ch211-170d8.8
TU95705 other downstream 295947 17325044 ~ 17401228 (-) False LOC122350953
XR_006251564.1 other downstream 335325 17359385 ~ 17361850 (-) False zgc:194007
XR_006251566.1 other downstream 335325 17359385 ~ 17361850 (-) False zgc:194007
XR_006251565.1 other downstream 335325 17359385 ~ 17361850 (-) True zgc:194007
TU95703 other downstream 353436 17323060 ~ 17343739 (-) False LOC122350953
XR_006251590.1 other upstream 408038 18107453 ~ 18112701 (-) False LOC122350290
TU96073 other upstream 455720 18155135 ~ 18157543 (-) True G64967
TU96164 other upstream 860252 18559667 ~ 18560334 (-) True G65033
TU96415 other upstream 1331572 19030987 ~ 19039551 (-) False LOC122350102
XR_006251696.1 other upstream 1502862 19202277 ~ 19202377 (-) True LOC122351133

Expression Profile