RNA id: XM_043247950.1


Basic Information

Item Value
RNA id XM_043247950.1
length 1245
RNA type mRNA
GC content 0.51
exon number 12
gene id slc35d2
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 558256 ~ 563214 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGAACGCGGTTATGTAACGCGCTCGTTCAGCGGCTCTCCGGACTGGCTTCGGACCCGAGCGCAGCATGCTCGTCTCCAGACCGGCGAAAGGAGCGAAAACCGCGAGCGCCGAGGAGCTTCTCGCCTGAGGGAAACCGAAACAGACATGACGTTGAGCGGCGAGGGCGAGCGCGCGAGACTCATGAAGTTCGCTTCCGCCGCCTTTTACGCCCTTTGCTCGTTTTCCATCATCGTGgtcaataaaagtattttaactgAATACAAGTTCCCGTCGTTTATGTTTCTCGGGATCGGACAGATGACGGCTACGATCATCATTCTGTACGTTGCCAAAATGAACAAAGCAGTCAGCTTTCAGGACTTCGACAAAAGTATTCCTGCAAAgATATTTCCTTTGCCGTTGCTGTACGTGGGGAATCACGTGACCGGATTAGGAGGCACTAAGAAACTCAGCTTACCCATGTTCACTGTGCTCAGAAAATTCACCATTCTACTCACAATGATCATGGAATCCAGGATACTGAGGAAAAGCTTTGCTCCGTCGCTGGTTTGCAGCGTTCTGGCTATAGTCGCGGGCGCTCTGGTGGCGGCCAGCTCGGACCTGTCCTTCAACGCCGAAGGATACACGTTTGTTCTGCTGAACGACGTCTTCACGGCCGCTAGTGGAGTTTACACCAAGAAGAAACTGGGGATGGAGGGTCTGGGCAAATACGGGGTTTTGTTTTATAACgcttttatcatcatcatccccACGGTCGTGGTGAGCGCTTACACCGGAGACCTGCAGAAGGCTCTGACCTTTGAAGGATGGATGTCTGTTgtgttcatatttcattttttattgtcttgTGTCATGGGgtttattttgatgtattCCATCATCCTCTGCAGTTATTATAACACAGCACTAACCACCACAGTCGTCGGGGCAGTTAAAAACGTTGCTGTGATGTATATCGGTATGTTCGTCGGCGGAGACTATGTCTTCTCGTGGACAAACTTCATAGGGCTAAATATATGCATCTCGGCGGCTCTGATTTACTCCTACATCACGTTTCACAGCAGCGCCCCGGAAGCCACCGAAGACAAGCTGAGCGTTCACGTCACAGAGAGCCTTCCGGAGAGAACGTGACGCTCCGCCGCGCTTTTACCCAGAAACCTCTCGCCGCTGGACGAGTCGGACGTTGCCTCCTTTTCCCATTGTGTGGTTTGTTTGCAATAAAACACAACTGCGACAACCAGGAA

Function

GO: NA

KEGG:

id description
K15281 SLC35D; solute carrier family 35

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU88300 lncRNA downstream 6374 514767 ~ 551882 (-) True G59739
TU88322 lncRNA downstream 10345 545919 ~ 547911 (-) True G59750
TU88237 lncRNA downstream 321599 236074 ~ 236657 (-) True G59688
TU88239 lncRNA downstream 321599 236074 ~ 236657 (-) False G59688
TU88197 lncRNA downstream 474403 83574 ~ 83853 (-) True G59654
TU88788 lncRNA upstream 52067 615281 ~ 617472 (-) True G60016
TU88829 lncRNA upstream 97221 660435 ~ 661098 (-) True G60036
TU88765 lncRNA upstream 159976 723190 ~ 725000 (-) True G60003
TU88767 lncRNA upstream 162050 725264 ~ 727029 (-) False LOC122349987
TU88853 lncRNA upstream 169626 732840 ~ 734242 (-) False csgalnact1b
XM_043247017.1 mRNA downstream 25868 362578 ~ 532388 (-) False fbxl17
XM_043247016.1 mRNA downstream 25882 362578 ~ 532374 (-) True fbxl17
XM_043247018.1 mRNA downstream 25882 448521 ~ 532374 (-) False fbxl17
XM_043247900.1 mRNA downstream 262986 202147 ~ 295270 (-) False efna5b
XM_043247899.1 mRNA downstream 262986 202147 ~ 295270 (-) True efna5b
XM_043247734.1 mRNA upstream 5372 568586 ~ 570967 (-) False ccl27a
XM_043247522.1 mRNA upstream 9369 572583 ~ 576178 (-) True LOC122350794
XM_043246779.1 mRNA upstream 17815 581029 ~ 586701 (-) False ubox5
XM_043246782.1 mRNA upstream 17815 581029 ~ 586646 (-) False ubox5
XM_043246781.1 mRNA upstream 17815 581029 ~ 586636 (-) True ubox5
TU88755 other upstream 2672 565886 ~ 570973 (-) True ccl27a
TU88852 other upstream 163975 727189 ~ 731620 (-) False LOC122349987
TU88902 other upstream 572187 1135401 ~ 1138152 (-) True G60098
XR_006251689.1 other upstream 577484 1140698 ~ 1159246 (-) True commd10
TU89022 other upstream 788696 1351910 ~ 1356931 (-) False LOC122350266

Expression Profile