RNA id: XM_043247983.1


Basic Information

Item Value
RNA id XM_043247983.1
length 2066
RNA type mRNA
GC content 0.52
exon number 2
gene id rmi1
representative False

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 22366400 ~ 22370617 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTTTATGATTAGCTAACGCGGCCGCTGTCTTTTTAGATACGAGGTGATCGTGATGTGGATTTTTGCAAGTTATGAAGTATCAAAAAAGTGAATTAGCCGCCGGTAAGGAGTCACAGTTGAAGCTGCAGCGTTGGGGACAGTGAGAGGATGTCAGTGGGTGAAGTCCAGGTTACCCAGGCATGGCTGCGTTCTCAATGGCACATCCAGGTCCCTCATGCCTGGCTGGACGCTTGCGTGAACTGGATAAAGGAGGAAGCGGAAAGCGAAGCCGTGCCTCAGATGCTGCTGAATCAGCGCGTCCTGGAGCAATGGCTGCTGACTGACCTGCGAGATCTTTCCCACCCGGTGCTCCCTGAAAGAATATCCGAGGCACAGAAAACCGAACTAAGTACCTGTTTCTGCCTTCAGATGGACTCCCTGCTAGACGTCAGCCAGCCTGCCTACACTCAGCTGCAGCGTATTCGGGGCACCGACTGCTCCAATGATCAAGTCTCGGCGGTCACACAGGAAACTCAGCGGCCGTGGGAGGCCAAGCCCACACGTATGTTGATGTTGCAGCTCACGGATGGAGTGCAGAGCCTGGAGGGTATGGAATACCGGCCCATCCCAGCTTTAAGCACCAACTTGGCGCCTGGGACCAAGATACAGCTAGTCGGTCCCATTGCCGTCCGTCTGGGGGTGCTGCTCCTGAAAGCAGAGAATGTGAAGGTGTTGGGTGGGGAGGTGGAACAACTTTTGGAGCTTTACTCTCAAAGCAGAGTGCTTTGCGGGACACTCGGTTTGCCTGAGGAGAGCCATCCACAAGCTGAGGAACCGGATGACCTGGAGCTCCTGGCCAGTGTAGAGGCTCCAGCAGAGCTTCAGGTAGCTGACAGCGGCTATGACAGCATGGCTTCAGACACTTACTTCAGACCAGCTTGGCCCCAGCCTCGTCTTCAAGCGGCACCCAATCTCAGAGAAGACGACTGGGACATGGACGAAATTCCAGATGACGACTTCAGGAGTATTCCAGACGATTTTGACCACGTTCCACAAAATGTGGAGGACGATGCTCCTGAGGACTTTGATGACATCCCGTTAGAAGAGCTGGAGAGCGTCATGAGCCCAATAGATTGCAAACCCAATGCAATCCAGTCCAGAGTCGAAGAGCCAAGCCTTTCACGTTTTCGGACTACTCTCAGAGTTAGTGACGCATTTGTTGCTGGATCCTCCGCAAACGCAGTTGAGGAACCTGAAGCAAACTTATCTAACCAACCTAAAACTGAAGAACCAAGCCAGACCTTTCGCTCTAAAACTCTGCTTGGCACCACCAGCCAAGGCAGAATCTTCAATGAAGTTCCTCACACATCCATGTCAAGTTCCTCTACAAACACCGCTGGCTCTCTTGCTTACCTACCTGCTCCACCATACCTCTGCGTGCTACAGGCTGGCCACTGGTCGCCCGCCGGAGTTCGAGTTTTACAGCTGCAAGCTTTCATCGTTACACTCAAAGGAAATCTGCGCAGTAGTAGTGGCGCGTGGAAACTCGAGGCCACTATATCGGACGGATCCGGGTACTTGGATGTGGATCTGTCAGACGCCATGCTCACTGAACTCATCGGCTACACCGCAGCAGAGGCTCGAGTGCTGCGGAAAGACCCGTCGAGGCGCGCTGAGGTGGACCGAGGGATTCTGCACTGTCAGAGAGAGCTGGTGGATATGTGCTGCATGATGAGCGTACAGGTGGATGAGACGGGCAGAGGAGCTGTGCTCCGTGTCAGTCCGCTCTCCGACAAGGACTGCTCCGAGATACAgaaaagagtgaaagagaggaGGAACTAAACCCTGCTTATTCTCTGGACTCTCTGTAAGCCTAATCTGACAGTGTTTGTGTAGAATCACTCAGTGctttcttttgatattttagtgATTCGCTTTGGTTCACACAGACTGAAGAAAACCGCTTTTAATGCACTTCACTCACATCTGTTGCAGAATCCACCGTGATCCGtttttgtaaatagtttttcGTTCGATTTTTGCTGTCTTTTGAATGTgattgaataaattaacaaaGATCGTTTAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU97837 lncRNA downstream 718 22365276 ~ 22365682 (-) True G66142
TU97838 lncRNA downstream 1287 22364901 ~ 22365113 (-) True G66143
TU97817 lncRNA downstream 70447 22293439 ~ 22295953 (-) True G66131
XR_006251666.1 lncRNA downstream 291929 22073687 ~ 22074471 (-) True LOC122350974
TU97807 lncRNA downstream 297643 22064898 ~ 22068757 (-) False LOC122350973
TU97845 lncRNA upstream 6296 22376910 ~ 22378639 (-) True G66147
TU97871 lncRNA upstream 15468 22386082 ~ 22387783 (-) True G66163
TU97872 lncRNA upstream 15468 22386082 ~ 22386883 (-) False G66163
TU97941 lncRNA upstream 177037 22547651 ~ 22549318 (-) True G66206
TU97942 lncRNA upstream 209788 22580402 ~ 22625177 (-) True G66207
XM_043247068.1 mRNA downstream 1577 22324786 ~ 22364823 (-) False ntrk2a
XM_043247067.1 mRNA downstream 1577 22324786 ~ 22364823 (-) False ntrk2a
XM_043247066.1 mRNA downstream 1578 22324786 ~ 22364822 (-) True ntrk2a
XM_043246626.1 mRNA downstream 75553 22283349 ~ 22290847 (-) True naa35
XM_043247911.1 mRNA downstream 100539 22243202 ~ 22265861 (-) True gfpt1
XM_043247396.1 mRNA upstream 67856 22438470 ~ 22457269 (-) True rasef
XM_043246063.1 mRNA upstream 141338 22511952 ~ 22515035 (-) True LOC122349924
XM_043246268.1 mRNA upstream 254809 22625423 ~ 22628559 (-) True LOC122350076
XM_043246032.1 mRNA upstream 266661 22637275 ~ 22640323 (-) False LOC122349902
XM_043246605.1 mRNA upstream 356566 22727180 ~ 22736160 (-) False LOC122350259
TU97793 other downstream 100585 22261239 ~ 22265815 (-) False gfpt1
TU97794 other downstream 100585 22261385 ~ 22265815 (-) False gfpt1
TU97809 other downstream 268592 22079451 ~ 22097808 (-) False antxr1a
TU97810 other downstream 270338 22082021 ~ 22096062 (-) False antxr1a
TU97805 other downstream 297643 22064898 ~ 22068757 (-) False LOC122350973
XR_006251538.1 other upstream 266661 22637275 ~ 22640307 (-) True LOC122349902
TU98109 other upstream 425008 22795622 ~ 22796362 (-) True G66310
TU98104 other upstream 464073 22834687 ~ 22835591 (-) False ddx51
TU98264 other upstream 1206339 23576953 ~ 23583368 (-) True G66410
TU98323 other upstream 1287451 23658065 ~ 23663536 (-) True G66451

Expression Profile