RNA id: XM_043247984.1


Basic Information

Item Value
RNA id XM_043247984.1
length 558
RNA type mRNA
GC content 0.53
exon number 4
gene id hes2.1
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 23740350 ~ 23741231 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCATTCGGTTCTCGAATGACTGTGGCTCAGAGAAAAGAGGCACACGAATTGAGAAAGACTCTCAAGCCATTGATGGAAAAAAGAAGGCGAGCTCGCATTAACGAGAGCCTCAATCACTTAAAAACACTCATACTCCCTCTGGTCGGCAAAGACGCTTCATGCTATTCAAAGCTGGAGAAAGCCGACATTCTCGAAATGACTGTGCGGTTCCTCAGAGACCTGCCTTCCTCGTCAGCTAAAGGTCAAACAGACAGCTACAAAGAGGGATATAAAGCCTGCTTGCAGCGCATCTCCGCGATGCTGCCGCAGTCTAACATCGAAACGCAAACCCGTCAACGCGTCAACGAGTTCATTCAGCACTCGATGGCGTCTGCGACGTCCTCCTGCCAGAACTGCTGTGCTCAGAACTCCAGAATGATTTCCCAAATGCACCAGAGACTTGTAAGCATGAGGAGCAACAGCTATGCGACGGAGAACCAGTCCACGGGCACCGCGTCTGCTCCCAGCCAACCCCAGCCTGCGCCGCAGGAAGCTGTGGACATGTGGAGACCGTGGTGA

Function

GO:

id name namespace
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
K09087 HES2_6_7; hairy and enhancer of split 2/6/7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006251574.1 lncRNA upstream 58518 23676434 ~ 23681832 (+) True LOC122350145
TU98278 lncRNA upstream 116879 23620927 ~ 23623471 (+) True G66418
TU98273 lncRNA upstream 123668 23615216 ~ 23616682 (+) True G66416
TU98180 lncRNA upstream 305317 23434118 ~ 23435033 (+) True G66351
TU98176 lncRNA upstream 306605 23432809 ~ 23433745 (+) True G66350
XM_043246391.1 mRNA upstream 75916 23658081 ~ 23664434 (+) True ybx1
XM_043246392.1 mRNA upstream 75916 23658082 ~ 23664434 (+) False ybx1
XM_043247538.1 mRNA upstream 83499 23635149 ~ 23656851 (+) True ppih
XM_043247539.1 mRNA upstream 83499 23635192 ~ 23656851 (+) False ppih
XM_043246995.1 mRNA upstream 106294 23632350 ~ 23634056 (+) True ndufa7
XM_043246878.1 mRNA downstream 9015 23750246 ~ 23752431 (+) True hes2.2
XM_043246225.1 mRNA downstream 11358 23752589 ~ 23804049 (+) True acot7
XM_043246226.1 mRNA downstream 87435 23828666 ~ 23864915 (+) True LOC122350042
XM_043247778.1 mRNA downstream 130005 23871236 ~ 23898426 (+) False LOC122350978
XM_043247776.1 mRNA downstream 130007 23871238 ~ 23900075 (+) False LOC122350978
TU98282 other upstream 106285 23632383 ~ 23634065 (+) False ndufa7
TU98168 other upstream 588403 23054626 ~ 23151947 (+) False prdm16
TU98063 other upstream 754766 22984040 ~ 22985584 (+) False mfn2
TU97654 other upstream 1619554 22119913 ~ 22120796 (+) True G66011
TU97652 other upstream 1622516 22116283 ~ 22117834 (+) True G66010
TU98369 other downstream 11337 23752568 ~ 23783631 (+) False acot7
TU98363 other downstream 12230 23753461 ~ 23783631 (+) False acot7
TU98365 other downstream 12230 23753461 ~ 23783631 (+) False acot7
TU98371 other downstream 14460 23755691 ~ 23783631 (+) False acot7

Expression Profile