Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006251539.1 |
| length | 817 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 3 |
| gene id | LOC122349907 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056706.1 |
| NCBI id | CM032075.1 |
| chromosome length | 24299999 |
| location | 2998907 ~ 3000982 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU89440 | lncRNA | upstream | 44913 | 2953016 ~ 2953994 (+) | True | G60452 |
| TU89328 | lncRNA | upstream | 364892 | 2632717 ~ 2634015 (+) | False | G60369 |
| TU89329 | lncRNA | upstream | 364892 | 2633145 ~ 2634015 (+) | True | G60369 |
| TU89315 | lncRNA | upstream | 386680 | 2610317 ~ 2612227 (+) | True | G60361 |
| XR_006251673.1 | lncRNA | upstream | 439859 | 2557030 ~ 2559048 (+) | True | LOC122351006 |
| TU89774 | lncRNA | downstream | 54445 | 3055427 ~ 3056019 (+) | True | G60660 |
| TU89775 | lncRNA | downstream | 55317 | 3056299 ~ 3057846 (+) | True | G60661 |
| TU89782 | lncRNA | downstream | 75894 | 3076876 ~ 3080723 (+) | True | G60668 |
| TU89788 | lncRNA | downstream | 84774 | 3085756 ~ 3086373 (+) | True | G60673 |
| TU89844 | lncRNA | downstream | 568512 | 3569494 ~ 3570284 (+) | True | G60718 |
| XM_043246714.1 | mRNA | upstream | 46223 | 2948990 ~ 2952684 (+) | True | gatd3l |
| XM_043246712.1 | mRNA | upstream | 51558 | 2943281 ~ 2947349 (+) | True | LOC122350330 |
| XM_043246713.1 | mRNA | upstream | 51943 | 2943282 ~ 2946964 (+) | False | LOC122350330 |
| XM_043246715.1 | mRNA | upstream | 55702 | 2939263 ~ 2943205 (+) | True | tmem127 |
| XM_043247470.1 | mRNA | upstream | 65402 | 2930254 ~ 2933505 (+) | True | ufd1l |
| XM_043247559.1 | mRNA | downstream | 14367 | 3015349 ~ 3033899 (+) | True | adra1aa |
| XM_043247953.1 | mRNA | downstream | 496442 | 3497424 ~ 3525944 (+) | True | lrrtm4l2 |
| XM_043247952.1 | mRNA | downstream | 496442 | 3497424 ~ 3525944 (+) | False | lrrtm4l2 |
| XM_043247890.1 | mRNA | downstream | 554616 | 3555598 ~ 3568917 (+) | True | vsig8b |
| XM_043247345.1 | mRNA | downstream | 574549 | 3575531 ~ 3576550 (+) | True | LOC122350663 |
| TU89218 | other | upstream | 959071 | 2037752 ~ 2039836 (+) | False | LOC122350758 |
| TU89217 | other | upstream | 962927 | 2033892 ~ 2035980 (+) | True | LOC122350053 |
| TU89216 | other | upstream | 965844 | 2030878 ~ 2033063 (+) | False | LOC122350053 |
| TU89212 | other | upstream | 981387 | 2014880 ~ 2017520 (+) | False | polb |
| TU89150 | other | upstream | 1080536 | 1915460 ~ 1918371 (+) | True | G60259 |
| TU89939 | other | downstream | 847632 | 3848614 ~ 3850557 (+) | True | G60788 |
| XR_006251567.1 | other | downstream | 923879 | 3924861 ~ 3931488 (+) | False | LOC122350109 |
| XR_006251613.1 | other | downstream | 1047637 | 4048619 ~ 4073897 (+) | False | ccdc120a |
| TU90648 | other | downstream | 2103588 | 5104570 ~ 5126254 (+) | False | LOC122350082 |
| TU90652 | other | downstream | 2103588 | 5104570 ~ 5263963 (+) | True | LOC122350082 |
