RNA id: XR_006251683.1



Basic Information


Item Value
RNA id XR_006251683.1
length 589
lncRNA type inter_gene
GC content 0.48
exon number 4
gene id LOC122351100
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 15767668 ~ 15781887 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCTGCTTCGATAGGCAGCAGCAGTCATCCACAGTATAAGGCCATTCTCACAGAAAAGATTTCTTTCTCTTGGCTAGTTATGCTGAATGGCCATGTTGATTCGATTGGAGACCAGTGCATGTTAACACAACATTATATCGTCCGTgcaaccacaaaacaaaacagaataAAAACCGCTGAAAACGGAGAGCGGAGGTTATAGGACAGCTTAAGAACACTAAAGGGTTTTAAATCTATCTCCATCcccctctctttccttctctcagCTGCCCAAACAACAAGGCCTGAAAAAGATTGCAGTTCATTTCAAAGCGCAGTGGATGGAGGCCTCATTTACGCGCTCCTGGCAACTCAATCAGGCCAGCCAGCCCTGATGAactctctctctctcatggcCGACTGGGCTGGAGTGTCCCCAGTGTCCTCTATTACCCAGCGCCCCACTGAACATGCTCTGCAGTCTGCTGACCTCCTGCCCTGCCTGTCACCCTGATGGCTACTGTTATCCCAGGCTACTTATTTCACCAAAACGGCCTTTTGTTCCTCCTTGTATTGAAAACATCAAGCCAAGCCAATTACAGGCATAAACA

Function


GO:

id name namespace
GO:0022412 cellular process involved in reproduction in multicellular organism biological_process

KEGG:

id description
ko04114 Oocyte meiosis

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU95247 lncRNA downstream 115809 15651636 ~ 15651859 (-) True G64409
TU95187 lncRNA downstream 471447 15295350 ~ 15296221 (-) True G64359
TU95185 lncRNA downstream 474683 15292345 ~ 15292985 (-) True G64357
TU95184 lncRNA downstream 477177 15290269 ~ 15290491 (-) True G64356
TU95183 lncRNA downstream 478476 15288911 ~ 15289192 (-) True G64355
TU95371 lncRNA upstream 280992 16062879 ~ 16063753 (-) True G64476
XR_006251675.1 lncRNA upstream 297475 16079362 ~ 16094560 (-) True LOC122351008
TU95376 lncRNA upstream 349724 16131611 ~ 16132812 (-) True G64481
XR_006251654.1 lncRNA upstream 479650 16261537 ~ 16283392 (-) True LOC122350933
TU95397 lncRNA upstream 591434 16373321 ~ 16376597 (-) True G64502
XM_043247217.1 mRNA downstream 66818 15652830 ~ 15700850 (-) True mvb12bb
XM_043247213.1 mRNA downstream 119346 15578108 ~ 15648322 (-) True LOC122350591
XM_043247774.1 mRNA upstream 52078 15833965 ~ 15948783 (-) False pbx3b
XM_043247772.1 mRNA upstream 52078 15833965 ~ 15948783 (-) False pbx3b
XM_043247769.1 mRNA upstream 52078 15833965 ~ 15948783 (-) False pbx3b
XM_043247771.1 mRNA upstream 52078 15833965 ~ 15948783 (-) False pbx3b
XM_043247767.1 mRNA upstream 52078 15833965 ~ 15948783 (-) False pbx3b
XR_006251609.1 other downstream 66772 15649226 ~ 15700896 (-) False mvb12bb
XR_006251608.1 other downstream 66772 15656919 ~ 15700896 (-) False mvb12bb
TU95181 other downstream 483538 15283861 ~ 15284130 (-) True G64353
TU95023 other downstream 985958 14779531 ~ 14781710 (-) True G64228
XR_006251614.1 other downstream 1036277 14724208 ~ 14731391 (-) False slc20a1a
TU95424 other upstream 625947 16407834 ~ 16409664 (-) False LOC122350093
TU95703 other upstream 1541173 17323060 ~ 17343739 (-) False LOC122350953
TU95705 other upstream 1543157 17325044 ~ 17401228 (-) False LOC122350953
XR_006251564.1 other upstream 1577498 17359385 ~ 17361850 (-) False zgc:194007
XR_006251566.1 other upstream 1577498 17359385 ~ 17361850 (-) False zgc:194007

Expression Profile