RNA id: XR_006251693.1



Basic Information


Item Value
RNA id XR_006251693.1
length 81
RNA type snoRNA
GC content 0.38
exon number 1
gene id LOC122351130
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 8429694 ~ 8429774 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATTCGCATACGTGATGATACTTGATGTTGGTAGGGACATCTGAGAATATTTGATGAGCATCAACATCTCTGATATGCGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251686.1 lncRNA downstream 160477 8253538 ~ 8269217 (-) True LOC122351107
XR_006251685.1 lncRNA downstream 160477 8255469 ~ 8269217 (-) False LOC122351107
XR_006251572.1 lncRNA downstream 196920 8217019 ~ 8232774 (-) False LOC122350139
TU91781 lncRNA downstream 212277 8210043 ~ 8217417 (-) True LOC122350139
XR_006251635.1 lncRNA downstream 475052 7951561 ~ 7954642 (-) True LOC122350891
TU91990 lncRNA upstream 78117 8507891 ~ 8508123 (-) True G62120
XR_006251637.1 lncRNA upstream 282263 8712037 ~ 8739931 (-) True LOC122350893
TU92069 lncRNA upstream 282449 8712223 ~ 8739953 (-) False LOC122350893
TU92070 lncRNA upstream 282449 8712223 ~ 8713432 (-) False LOC122350893
TU92189 lncRNA upstream 483708 8913482 ~ 8914004 (-) True G62239
XM_043247881.1 mRNA downstream 2988 8422739 ~ 8426706 (-) True tor3a
XM_043247751.1 mRNA downstream 7499 8417430 ~ 8422195 (-) True calr
XM_043246729.1 mRNA downstream 13141 8392345 ~ 8416553 (-) False eps15
XM_043247873.1 mRNA upstream 1419 8431193 ~ 8457234 (-) False osbpl9
XM_043247872.1 mRNA upstream 1419 8431193 ~ 8457234 (-) False osbpl9
XM_043247871.1 mRNA upstream 1419 8431193 ~ 8457234 (-) True osbpl9
XM_043247875.1 mRNA upstream 1419 8431193 ~ 8449770 (-) False osbpl9
XM_043247874.1 mRNA upstream 1419 8431193 ~ 8447471 (-) False osbpl9
XR_006251694.1 other downstream 150 8429474 ~ 8429544 (-) True LOC122351131
XR_006251695.1 other downstream 374 8429253 ~ 8429320 (-) True LOC122351132
XR_006251691.1 other downstream 790 8428825 ~ 8428904 (-) True LOC122351128
XR_006251692.1 other downstream 2007 8427615 ~ 8427687 (-) True LOC122351129
XR_006251596.1 other downstream 13141 8392345 ~ 8416553 (-) False eps15
TU92042 other upstream 217507 8647281 ~ 8649965 (-) False mrps36
TU92043 other upstream 217507 8647281 ~ 8649965 (-) True mrps36
XR_006251592.1 other upstream 222652 8652426 ~ 8657286 (-) False pola2
XR_006251623.1 other upstream 828178 9257952 ~ 9262826 (-) False mindy4
TU92748 other upstream 1524976 9954750 ~ 9961701 (-) False mllt1a

Expression Profile