RNA id: TU186164


Basic Information

Item Value
RNA id TU186164
length 1016
lncRNA type inter_gene
GC content 0.39
exon number 2
gene id G137614
representative False

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 93285 ~ 94573 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

TAATCTCTGCTGTATTAAACTGTGTTGAGGCACTGCTGGACTGTGTTGTTGGTGTTTTGTGTGGATTGTGTGTAGATTCAGTAGCTTTGTGTCGTTTTGTTTCCGTcacaaaataaagagaaagaaacgtGAAGCTGCCACTTAAATCTGGTACGATTCCCTGGGTTTAACCCGGCAGTGTTTAGACCAGTACTGAACCCCTGAAACCTCGTCTGAGAGATAAACGCAGAGAATGGAAAGAAATACtggctttaaaagaaagtaCACTGGCCTGACTCGAGCAACCTCCAGGGGCGCCCTCTATACCACCGCCGTACGGCGCTCTGTTTTTAatagctctgtgtgtgttatCATCCTAAACACCATCGATACACAACCTCAACAATATTACCTCCCTTTACTCTTAAATAATTCATTTCCCTTTCTGAGACACATTTCGGGTAAAGAGCTTATTTGCCAATTACTGACAAACCgagcaccaaaaaaaaacgtgaaactatatatttatataataaccATAAAGAAAAAATCTGCATCTCAACGCTtcaagtattaattaaaatatgcaCACTGCAAATGACTCGGACAACAACAATAGCCTTATTTGACCCCACAGTTTCACACACTGCATGTTCTACTggattacaaaataaaagctgGAGAAACGGACCAAGGAAATGTGTTCTTTCTGAAGAAAATCAACAGTGTAGCGTGGCAAGTTACAacggtccaccttaaatacattaaagtataaaaaggactttttaaaagtattttaaaagaaaaatacactttgcagtgtaaaagaaaataaaatcttgTTAAATCTGAAGATTATATTACAGTTCAACTGGAAATAAAGACACTGACAATAAACTGGATGTAGCTGTAGTGTGAAACTGTAGTACTGTAGAGCGTAGTACTGTAGAGCGTAGTACTGTAGAGCGTGGTACTGTAGAGCGTGGTACTGTAGAGCGTGGTACTGTAGAGCGTGGTACTGTAGAGCGTAGTACTGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU186132 lncRNA upstream 24423 55706 ~ 68862 (+) True G137596
TU186195 lncRNA downstream 32529 127102 ~ 130239 (+) True G137629
TU186197 lncRNA downstream 33595 128168 ~ 128699 (+) True G137630
TU186208 lncRNA downstream 80507 175080 ~ 176638 (+) True G137639
TU186191 lncRNA downstream 98736 193309 ~ 193870 (+) True G137627
TU186188 lncRNA downstream 98823 193396 ~ 193938 (+) False G137627
XM_007235353.3 mRNA upstream 7174 75683 ~ 86111 (+) True LOC103047317
XM_007235354.3 mRNA upstream 7174 75683 ~ 86111 (+) False LOC103047317
XM_022677731.1 mRNA upstream 52537 31377 ~ 40748 (+) True LOC103023540
XM_007235358.3 mRNA downstream 67284 161857 ~ 173049 (+) True klhl20
XM_022677734.1 mRNA downstream 83090 177663 ~ 192997 (+) True dars2
XM_022677736.1 mRNA downstream 344125 438698 ~ 694723 (+) True astn1
XM_022677737.1 mRNA downstream 344125 438698 ~ 694723 (+) False astn1
XM_022677739.1 mRNA downstream 344126 438699 ~ 694723 (+) False astn1
XR_002651002.1 other downstream 668143 762716 ~ 781196 (+) False rfwd2
TU186393 other downstream 886407 980980 ~ 988638 (+) True G137756
TU186409 other downstream 943296 1037869 ~ 1039926 (+) False mrps14
TU186490 other downstream 1402726 1497299 ~ 1499956 (+) False G137826
XR_002650979.1 other downstream 1532382 1626955 ~ 1638255 (+) True LOC111194189

Expression Profile