Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU192883 |
| length | 708 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G142455 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 19431431 ~ 19432138 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU192880 | lncRNA | upstream | 8969 | 19419660 ~ 19422462 (+) | True | G142453 |
| TU192875 | lncRNA | upstream | 13748 | 19413632 ~ 19417683 (+) | True | G142450 |
| XR_002651029.1 | lncRNA | upstream | 149315 | 19230169 ~ 19282116 (+) | True | LOC111194334 |
| TU192857 | lncRNA | upstream | 212384 | 19213366 ~ 19219047 (+) | True | G142434 |
| TU192855 | lncRNA | upstream | 260635 | 19170527 ~ 19170796 (+) | True | G142432 |
| TU192890 | lncRNA | downstream | 536 | 19432674 ~ 19433057 (+) | True | G142458 |
| TU193091 | lncRNA | downstream | 89539 | 19521677 ~ 19521888 (+) | True | G142603 |
| TU193102 | lncRNA | downstream | 261798 | 19693936 ~ 19696283 (+) | True | G142614 |
| TU193107 | lncRNA | downstream | 292307 | 19724445 ~ 19728971 (+) | True | G142619 |
| TU193109 | lncRNA | downstream | 292307 | 19724445 ~ 19728971 (+) | False | G142619 |
| XM_022678166.1 | mRNA | upstream | 257 | 19425994 ~ 19431174 (+) | True | LOC111194335 |
| XM_022678167.1 | mRNA | upstream | 257 | 19428842 ~ 19431174 (+) | False | LOC111194335 |
| XM_022678164.1 | mRNA | upstream | 311901 | 19094766 ~ 19119530 (+) | True | LOC103046799 |
| XM_022678165.1 | mRNA | upstream | 311901 | 19094766 ~ 19119530 (+) | False | LOC103046799 |
| XM_022678160.1 | mRNA | upstream | 443990 | 18969886 ~ 18987441 (+) | True | LOC103047721 |
| XM_007240884.3 | mRNA | downstream | 656158 | 20088296 ~ 20115213 (+) | False | ripk1 |
| XM_007240883.3 | mRNA | downstream | 660522 | 20092660 ~ 20115213 (+) | True | ripk1 |
| XM_022678173.1 | mRNA | downstream | 770510 | 20202648 ~ 20220149 (+) | True | rnf138 |
| XM_022678174.1 | mRNA | downstream | 791638 | 20223776 ~ 20245141 (+) | True | mep1b |
| XM_022678180.1 | mRNA | downstream | 1124628 | 20556766 ~ 20574038 (+) | True | LOC111194338 |
| TU192788 | other | upstream | 537922 | 18856236 ~ 18893509 (+) | False | G142378 |
| TU192797 | other | upstream | 561114 | 18865450 ~ 18870317 (+) | True | G142384 |
| TU192790 | other | upstream | 572924 | 18856236 ~ 18858507 (+) | True | G142378 |
| TU192525 | other | upstream | 2226938 | 17203222 ~ 17204493 (+) | True | G142166 |
| TU192434 | other | upstream | 2357947 | 17058294 ~ 17073484 (+) | True | G142093 |
| TU193111 | other | downstream | 304168 | 19736306 ~ 19868292 (+) | True | G142620 |
| TU193252 | other | downstream | 785141 | 20217279 ~ 20220147 (+) | False | rnf138 |
| TU193349 | other | downstream | 1350445 | 20782583 ~ 20790122 (+) | True | G142820 |
| TU193733 | other | downstream | 2166544 | 21598682 ~ 21601365 (+) | False | LOC103047556 |
| TU193751 | other | downstream | 2213767 | 21645905 ~ 21646705 (+) | True | G143122 |
