Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU194503 |
| length | 323 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G143699 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 23294066 ~ 23294388 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU194502 | lncRNA | upstream | 852 | 23292992 ~ 23293214 (+) | True | G143698 |
| TU194479 | lncRNA | upstream | 2142 | 23291312 ~ 23291924 (+) | True | G143684 |
| TU194497 | lncRNA | upstream | 104830 | 23187028 ~ 23189236 (+) | True | G143694 |
| TU194498 | lncRNA | upstream | 105496 | 23187028 ~ 23188570 (+) | False | G143694 |
| XR_002650973.1 | lncRNA | upstream | 108802 | 23181717 ~ 23185264 (+) | True | LOC111194181 |
| TU194505 | lncRNA | downstream | 1085 | 23295473 ~ 23295859 (+) | True | G143701 |
| TU194506 | lncRNA | downstream | 3422 | 23297810 ~ 23298390 (+) | True | G143702 |
| TU194511 | lncRNA | downstream | 12673 | 23307061 ~ 23312468 (+) | True | G143707 |
| TU194565 | lncRNA | downstream | 28924 | 23323312 ~ 23387571 (+) | True | G143751 |
| XR_002650975.1 | lncRNA | downstream | 29534 | 23323922 ~ 23327810 (+) | True | LOC111194183 |
| XM_007238909.3 | mRNA | upstream | 3441 | 23255677 ~ 23290625 (+) | True | emilin2 |
| XM_022677622.1 | mRNA | upstream | 43320 | 23190464 ~ 23250746 (+) | True | smchd1 |
| XM_022677623.1 | mRNA | upstream | 43320 | 23190468 ~ 23250746 (+) | False | smchd1 |
| XM_007230336.3 | mRNA | upstream | 272712 | 23016781 ~ 23021354 (+) | True | adcyap1 |
| XM_022677727.1 | mRNA | downstream | 99822 | 23394210 ~ 23395111 (+) | True | LOC111194251 |
| XM_022677648.1 | mRNA | downstream | 141206 | 23435594 ~ 23442090 (+) | True | LOC103023765 |
| XM_022678211.1 | mRNA | downstream | 278415 | 23572803 ~ 23664047 (+) | False | LOC103024399 |
| XM_022678212.1 | mRNA | downstream | 300735 | 23595123 ~ 23664047 (+) | False | LOC103024399 |
| XM_022678209.1 | mRNA | downstream | 310871 | 23605259 ~ 23664047 (+) | True | LOC103024399 |
| trnaa-cgc_2 | other | upstream | 228708 | 23065287 ~ 23065358 (+) | True | trnaa-cgc_2 |
| trnat-cgu | other | upstream | 228967 | 23065028 ~ 23065099 (+) | True | trnat-cgu |
| TU194024 | other | upstream | 683619 | 22535685 ~ 22610447 (+) | False | G143324 |
| TU194021 | other | upstream | 683619 | 22591785 ~ 22610447 (+) | True | G143324 |
| TU193826 | other | upstream | 1419680 | 21870676 ~ 21874386 (+) | True | G143182 |
| XR_002650977.1 | other | downstream | 90394 | 23384782 ~ 23394167 (+) | True | LOC111194185 |
| TU194568 | other | downstream | 90780 | 23385168 ~ 23395240 (+) | False | LOC111194251 |
| TU194571 | other | downstream | 90780 | 23385168 ~ 23395240 (+) | False | LOC111194251 |
| TU194570 | other | downstream | 99898 | 23394286 ~ 23395240 (+) | False | LOC111194251 |
| LOC111194174 | other | downstream | 109300 | 23403688 ~ 23406894 (+) | True | LOC111194174 |
