Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU197509 |
| length | 669 |
| lncRNA type | sense_over |
| GC content | 0.40 |
| exon number | 3 |
| gene id | smim20 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 31717142 ~ 31719051 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU197377 | lncRNA | upstream | 67300 | 31648526 ~ 31649885 (+) | True | G145875 |
| XR_002651051.1 | lncRNA | upstream | 84260 | 31627040 ~ 31632925 (+) | False | LOC111194381 |
| XR_002651052.1 | lncRNA | upstream | 84260 | 31630143 ~ 31632925 (+) | False | LOC111194381 |
| TU197370 | lncRNA | upstream | 86444 | 31629258 ~ 31630741 (+) | True | LOC111194381 |
| TU197371 | lncRNA | upstream | 86444 | 31629258 ~ 31630741 (+) | False | LOC111194381 |
| TU197514 | lncRNA | downstream | 17745 | 31736796 ~ 31739792 (+) | True | G145966 |
| TU197516 | lncRNA | downstream | 17745 | 31736796 ~ 31739792 (+) | False | G145966 |
| TU197517 | lncRNA | downstream | 17745 | 31736796 ~ 31739792 (+) | False | G145966 |
| TU197519 | lncRNA | downstream | 19731 | 31738782 ~ 31739107 (+) | True | G145968 |
| TU197520 | lncRNA | downstream | 38046 | 31757097 ~ 31757667 (+) | True | G145969 |
| XM_007248006.3 | mRNA | upstream | 9230 | 31684228 ~ 31707955 (+) | True | LOC103032447 |
| XM_007248008.3 | mRNA | upstream | 47056 | 31666799 ~ 31670129 (+) | True | LOC103032972 |
| XM_007248011.3 | mRNA | upstream | 97653 | 31597346 ~ 31619532 (+) | False | acox3 |
| XM_007248012.3 | mRNA | upstream | 97653 | 31597479 ~ 31619532 (+) | True | acox3 |
| XM_022678419.1 | mRNA | upstream | 97653 | 31599152 ~ 31619532 (+) | False | acox3 |
| XM_007248003.3 | mRNA | downstream | 54453 | 31773504 ~ 31859657 (+) | False | rbpj |
| XM_007248002.3 | mRNA | downstream | 98696 | 31817747 ~ 31859657 (+) | True | rbpj |
| XM_007248000.3 | mRNA | downstream | 173475 | 31892526 ~ 31926550 (+) | True | tbc1d19 |
| XM_007247999.3 | mRNA | downstream | 215672 | 31934723 ~ 32002483 (+) | True | stim2 |
| XM_022678434.1 | mRNA | downstream | 1160639 | 32879690 ~ 33104229 (+) | False | pcdh7 |
| TU197207 | other | upstream | 362741 | 31352296 ~ 31354444 (+) | True | G145748 |
| TU197164 | other | upstream | 494851 | 31197218 ~ 31222334 (+) | True | G145711 |
| TU197121 | other | upstream | 587162 | 31073973 ~ 31130023 (+) | False | LOC103044823 |
| TU197029 | other | upstream | 802373 | 30911857 ~ 30914812 (+) | False | LOC103022860 |
| TU196945 | other | upstream | 1044998 | 30668799 ~ 30672187 (+) | True | G145543 |
| trnae-uuc_22 | other | downstream | 352304 | 32071355 ~ 32071426 (+) | False | trnae-uuc_22 |
| TU197717 | other | downstream | 893074 | 32612125 ~ 32612562 (+) | True | G146104 |
| TU198225 | other | downstream | 3680772 | 35399823 ~ 35402380 (+) | False | cct7 |
| TU198654 | other | downstream | 4772461 | 36491512 ~ 36494457 (+) | True | G146805 |
| XR_454044.3 | other | downstream | 4971642 | 36690693 ~ 36719287 (+) | True | acap1 |
