Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU197842 |
| length | 239 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G146209 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 33585920 ~ 33586391 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU197830 | lncRNA | downstream | 252256 | 33333345 ~ 33333664 (-) | True | G146198 |
| TU197762 | lncRNA | downstream | 736230 | 32844566 ~ 32849690 (-) | True | G146143 |
| TU197750 | lncRNA | downstream | 834648 | 32750772 ~ 32751272 (-) | True | G146133 |
| TU197749 | lncRNA | downstream | 842627 | 32742959 ~ 32743293 (-) | True | G146132 |
| TU197745 | lncRNA | downstream | 855058 | 32730652 ~ 32730862 (-) | True | G146128 |
| TU197852 | lncRNA | upstream | 75082 | 33661473 ~ 33661808 (-) | True | G146219 |
| TU197864 | lncRNA | upstream | 121264 | 33707655 ~ 33709779 (-) | True | G146229 |
| TU197867 | lncRNA | upstream | 147148 | 33733539 ~ 33733803 (-) | True | G146232 |
| TU197893 | lncRNA | upstream | 236069 | 33822460 ~ 33822955 (-) | True | G146253 |
| TU197894 | lncRNA | upstream | 236624 | 33823015 ~ 33823521 (-) | True | G146254 |
| XM_022678335.1 | mRNA | downstream | 1700511 | 31871057 ~ 31885409 (-) | True | cckar |
| XM_007248005.3 | mRNA | downstream | 1869195 | 31709203 ~ 31716725 (-) | True | plaa |
| XM_007248009.3 | mRNA | downstream | 1907374 | 31656834 ~ 31678546 (-) | True | sh3tc1 |
| XM_015605541.2 | mRNA | downstream | 1909549 | 31656834 ~ 31676371 (-) | False | sh3tc1 |
| XM_007248010.3 | mRNA | downstream | 1930811 | 31642324 ~ 31655109 (-) | True | htra3 |
| XM_022678436.1 | mRNA | upstream | 246943 | 33833334 ~ 34001620 (-) | True | arap2 |
| XM_022678437.1 | mRNA | upstream | 247331 | 33833722 ~ 34001620 (-) | False | arap2 |
| XM_007242055.3 | mRNA | upstream | 493863 | 34080254 ~ 34088604 (-) | True | paqr9 |
| XM_022678443.1 | mRNA | upstream | 516368 | 34102759 ~ 34109347 (-) | False | LOC111194385 |
| XM_022678442.1 | mRNA | upstream | 516368 | 34102759 ~ 34109347 (-) | True | LOC111194385 |
| TU197806 | other | downstream | 480333 | 33100297 ~ 33105587 (-) | True | G146175 |
| trnae-uuc_21 | other | downstream | 1529052 | 32056797 ~ 32056868 (-) | True | trnae-uuc_21 |
| TU197580 | other | downstream | 1705129 | 31872862 ~ 31880791 (-) | False | cckar |
| XR_002651049.1 | other | downstream | 2027459 | 31550529 ~ 31558461 (-) | False | LOC103035326 |
| TU197422 | other | downstream | 2083259 | 31500089 ~ 31502661 (-) | False | LOC103036756 |
| XR_001518498.2 | other | upstream | 198704 | 33785095 ~ 33785421 (-) | True | LOC107197333 |
| TU198346 | other | upstream | 1836574 | 35422965 ~ 35431920 (-) | False | hspa12b |
| TU198348 | other | upstream | 1876806 | 35463197 ~ 35479194 (-) | True | G146584 |
| TU198491 | other | upstream | 2297218 | 35883609 ~ 35884321 (-) | True | G146686 |
| XR_002651059.1 | other | upstream | 3541024 | 37127415 ~ 37192500 (-) | False | poln |
