Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU199073 |
| length | 243 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G147109 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 37446806 ~ 37447048 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002651060.1 | lncRNA | downstream | 49754 | 37395396 ~ 37397052 (-) | True | LOC111194392 |
| TU199049 | lncRNA | downstream | 49795 | 37386898 ~ 37397011 (-) | False | G147091 |
| XR_002651061.1 | lncRNA | downstream | 58212 | 37387413 ~ 37388594 (-) | True | LOC111194393 |
| TU199048 | lncRNA | downstream | 58357 | 37386898 ~ 37388449 (-) | False | G147091 |
| TU199050 | lncRNA | downstream | 58357 | 37386898 ~ 37388449 (-) | True | G147091 |
| XR_002651065.1 | lncRNA | upstream | 7964 | 37455012 ~ 37461192 (-) | False | LOC111194395 |
| XR_002651064.1 | lncRNA | upstream | 9527 | 37456575 ~ 37461192 (-) | False | LOC111194395 |
| TU199286 | lncRNA | upstream | 9948 | 37456996 ~ 37461139 (-) | False | LOC111194395 |
| TU199287 | lncRNA | upstream | 9948 | 37456996 ~ 37461139 (-) | False | LOC111194395 |
| TU199288 | lncRNA | upstream | 9948 | 37456996 ~ 37459174 (-) | True | LOC111194395 |
| XM_022678487.1 | mRNA | downstream | 23665 | 37246071 ~ 37423141 (-) | False | svep1 |
| XM_022678486.1 | mRNA | downstream | 23666 | 37246071 ~ 37423140 (-) | False | svep1 |
| XM_022678489.1 | mRNA | downstream | 23666 | 37246071 ~ 37423140 (-) | False | svep1 |
| XM_022678488.1 | mRNA | downstream | 23667 | 37246071 ~ 37423139 (-) | False | svep1 |
| XM_022678485.1 | mRNA | downstream | 23667 | 37246071 ~ 37423139 (-) | True | svep1 |
| XM_022678339.1 | mRNA | upstream | 14147 | 37461195 ~ 37466252 (-) | True | LOC103039127 |
| XM_022678490.1 | mRNA | upstream | 19786 | 37466834 ~ 37489535 (-) | True | LOC103042927 |
| XM_022678491.1 | mRNA | upstream | 19786 | 37466834 ~ 37472732 (-) | False | LOC103042927 |
| XM_007233803.3 | mRNA | upstream | 75185 | 37522233 ~ 37525107 (-) | True | LOC103040682 |
| XM_022678343.1 | mRNA | upstream | 214628 | 37661676 ~ 37672030 (-) | True | LOC111194362 |
| TU199053 | other | downstream | 55071 | 37352078 ~ 37391735 (-) | True | G147092 |
| XR_002651059.1 | other | downstream | 254306 | 37127415 ~ 37192500 (-) | False | poln |
| TU198491 | other | downstream | 1562485 | 35883609 ~ 35884321 (-) | True | G146686 |
| TU198348 | other | downstream | 1967612 | 35463197 ~ 35479194 (-) | True | G146584 |
| TU198346 | other | downstream | 2014886 | 35422965 ~ 35431920 (-) | False | hspa12b |
| TU199299 | other | upstream | 61613 | 37508661 ~ 37514452 (-) | True | G147302 |
| TU199360 | other | upstream | 276344 | 37723392 ~ 37726759 (-) | False | mrpl52 |
| TU199421 | other | upstream | 458717 | 37905765 ~ 37910873 (-) | False | LOC103047699 |
| XR_002651067.1 | other | upstream | 1566954 | 39014002 ~ 39017632 (-) | True | LOC103039602 |
| TU199785 | other | upstream | 1582950 | 39029998 ~ 39034183 (-) | True | LOC103028345 |
