Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007250727.2 |
| length | 1849 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 10 |
| gene id | LOC103046575 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 3187732 ~ 3193555 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU187453 | lncRNA | upstream | 12368 | 3156756 ~ 3175364 (+) | True | G138524 |
| TU187454 | lncRNA | upstream | 12368 | 3156756 ~ 3175364 (+) | False | G138524 |
| TU186879 | lncRNA | upstream | 68249 | 3115442 ~ 3119483 (+) | False | LOC103026108 |
| TU186876 | lncRNA | upstream | 73117 | 3110402 ~ 3114615 (+) | True | G138123 |
| TU186866 | lncRNA | upstream | 102867 | 3082118 ~ 3084865 (+) | False | LOC103024858 |
| TU187486 | lncRNA | downstream | 63346 | 3256901 ~ 3296382 (+) | True | G138534 |
| TU187564 | lncRNA | downstream | 299141 | 3492696 ~ 3494363 (+) | True | G138598 |
| TU187558 | lncRNA | downstream | 311021 | 3504576 ~ 3506945 (+) | True | G138593 |
| TU187578 | lncRNA | downstream | 331076 | 3524631 ~ 3526308 (+) | True | G138609 |
| TU187623 | lncRNA | downstream | 390463 | 3584018 ~ 3584290 (+) | True | G138642 |
| XM_007250662.3 | mRNA | upstream | 31678 | 3150876 ~ 3156054 (+) | True | txndc12 |
| XM_022677692.1 | mRNA | upstream | 37952 | 3147247 ~ 3149780 (+) | True | LOC107197652 |
| XM_007250661.3 | mRNA | upstream | 44785 | 3127745 ~ 3142947 (+) | True | LOC103026425 |
| XM_007250660.3 | mRNA | upstream | 68244 | 3115420 ~ 3119488 (+) | True | LOC103026108 |
| XM_007250726.2 | mRNA | upstream | 79228 | 3105446 ~ 3108504 (+) | True | LOC103045957 |
| XM_007250665.3 | mRNA | downstream | 993 | 3194548 ~ 3200085 (+) | True | cope |
| XM_022677831.1 | mRNA | downstream | 17005 | 3210560 ~ 3289693 (+) | True | st6galnac3 |
| XM_022677832.1 | mRNA | downstream | 117606 | 3311161 ~ 3361634 (+) | True | st6galnac5 |
| XM_022677833.1 | mRNA | downstream | 223871 | 3417426 ~ 3477561 (+) | True | ak5 |
| XM_022677837.1 | mRNA | downstream | 342862 | 3536417 ~ 3552555 (+) | True | miga1 |
| TU186618 | other | upstream | 1163346 | 2022755 ~ 2024386 (+) | True | G137929 |
| TU186579 | other | upstream | 1349215 | 1835477 ~ 1838517 (+) | False | LOC103042893 |
| XR_002650979.1 | other | upstream | 1549477 | 1626955 ~ 1638255 (+) | True | LOC111194189 |
| TU186490 | other | upstream | 1687776 | 1497299 ~ 1499956 (+) | False | G137826 |
| TU186409 | other | upstream | 2147806 | 1037869 ~ 1039926 (+) | False | mrps14 |
| TU187669 | other | downstream | 608298 | 3801853 ~ 3815437 (+) | False | LOC103047488 |
| TU187722 | other | downstream | 639700 | 3833255 ~ 3834460 (+) | True | G138701 |
| TU187723 | other | downstream | 639700 | 3833255 ~ 3834460 (+) | False | G138701 |
| TU187791 | other | downstream | 902461 | 4096016 ~ 4102214 (+) | False | LOC111194271 |
| TU187783 | other | downstream | 972487 | 4166042 ~ 4171980 (+) | False | LOC103023077 |
