Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022677660.1 |
| length | 931 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 4 |
| gene id | LOC111194186 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 1489305 ~ 1491340 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0042742 | defense response to bacterium | biological_process |
| GO:0048514 | blood vessel morphogenesis | biological_process |
| GO:0043066 | negative regulation of apoptotic process | biological_process |
| GO:0043154 | negative regulation of cysteine-type endopeptidase activity involved in apoptotic process | biological_process |
| GO:0045930 | negative regulation of mitotic cell cycle | biological_process |
| GO:0043027 | cysteine-type endopeptidase inhibitor activity involved in apoptotic process | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU186509 | lncRNA | upstream | 33566 | 1351274 ~ 1455746 (+) | True | G137839 |
| TU186520 | lncRNA | upstream | 48507 | 1440263 ~ 1440805 (+) | True | G137850 |
| TU186427 | lncRNA | upstream | 262795 | 1101388 ~ 1226517 (+) | True | G137782 |
| TU186389 | lncRNA | upstream | 477317 | 906454 ~ 1011995 (+) | True | G137754 |
| XR_452701.2 | lncRNA | upstream | 503158 | 980933 ~ 986154 (+) | True | LOC103021626 |
| TU186489 | lncRNA | downstream | 476 | 1491816 ~ 1499956 (+) | True | G137826 |
| TU186491 | lncRNA | downstream | 476 | 1491816 ~ 1499956 (+) | False | G137826 |
| TU186528 | lncRNA | downstream | 16925 | 1508265 ~ 1509483 (+) | False | G137856 |
| TU186527 | lncRNA | downstream | 16936 | 1508276 ~ 1509554 (+) | True | G137856 |
| TU186529 | lncRNA | downstream | 18313 | 1509653 ~ 1512939 (+) | False | G137857 |
| XM_022677760.1 | mRNA | upstream | 40285 | 1436940 ~ 1449027 (+) | True | rnf32 |
| XM_022677759.1 | mRNA | upstream | 154119 | 1300585 ~ 1335193 (+) | True | rbm33 |
| XM_007229176.3 | mRNA | upstream | 243543 | 1241235 ~ 1245769 (+) | True | LOC103046777 |
| XM_022677758.1 | mRNA | upstream | 265483 | 1217510 ~ 1223829 (+) | True | insig1 |
| XM_007229188.3 | mRNA | upstream | 322893 | 1128077 ~ 1166419 (+) | True | htr5a |
| XM_022677766.1 | mRNA | downstream | 73590 | 1564930 ~ 1594076 (+) | True | cdc73 |
| XM_022677768.1 | mRNA | downstream | 193053 | 1684393 ~ 1692239 (+) | True | LOC103022771 |
| XM_022677770.1 | mRNA | downstream | 232195 | 1723535 ~ 1735903 (+) | True | LOC103022156 |
| XM_022677771.1 | mRNA | downstream | 248831 | 1740171 ~ 1746238 (+) | True | LOC111194259 |
| XM_022677773.1 | mRNA | downstream | 285885 | 1777225 ~ 1802319 (+) | True | tsc22d2 |
| TU186409 | other | upstream | 449386 | 1037869 ~ 1039926 (+) | False | mrps14 |
| TU186393 | other | upstream | 500674 | 980980 ~ 988638 (+) | True | G137756 |
| XR_002651002.1 | other | upstream | 708116 | 762716 ~ 781196 (+) | False | rfwd2 |
| TU186165 | other | upstream | 1394739 | 93285 ~ 94573 (+) | True | G137614 |
| TU186490 | other | downstream | 5959 | 1497299 ~ 1499956 (+) | False | G137826 |
| XR_002650979.1 | other | downstream | 135615 | 1626955 ~ 1638255 (+) | True | LOC111194189 |
| TU186579 | other | downstream | 344137 | 1835477 ~ 1838517 (+) | False | LOC103042893 |
| TU186618 | other | downstream | 531415 | 2022755 ~ 2024386 (+) | True | G137929 |
| TU187669 | other | downstream | 2310513 | 3801853 ~ 3815437 (+) | False | LOC103047488 |
