Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022677926.1 |
| length | 1317 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 9 |
| gene id | LOC111194294 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 6975971 ~ 6989371 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0016491 | oxidoreductase activity | molecular_function |
| id | description |
|---|---|
| K11163 | DHRS1; dehydrogenase/reductase SDR family member 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU188697 | lncRNA | upstream | 42498 | 6931518 ~ 6933473 (+) | True | G139375 |
| TU188689 | lncRNA | upstream | 66310 | 6853944 ~ 6909661 (+) | False | G139371 |
| TU188688 | lncRNA | upstream | 119001 | 6853944 ~ 6856970 (+) | True | G139371 |
| TU188679 | lncRNA | upstream | 153285 | 6821915 ~ 6822686 (+) | True | G139362 |
| TU188658 | lncRNA | upstream | 207727 | 6768023 ~ 6768244 (+) | True | G139347 |
| TU188727 | lncRNA | downstream | 39911 | 7029282 ~ 7032672 (+) | True | LOC111194296 |
| XR_002651017.1 | lncRNA | downstream | 42439 | 7031810 ~ 7039380 (+) | False | LOC111194296 |
| TU188725 | lncRNA | downstream | 57047 | 7046418 ~ 7049729 (+) | True | G139395 |
| TU188732 | lncRNA | downstream | 97606 | 7086977 ~ 7087682 (+) | True | G139401 |
| TU189130 | lncRNA | downstream | 202537 | 7191908 ~ 7192404 (+) | True | G139710 |
| XM_015608064.2 | mRNA | upstream | 6772 | 6958536 ~ 6969199 (+) | True | LOC103043149 |
| XM_007258047.3 | mRNA | upstream | 25827 | 6945678 ~ 6950144 (+) | True | c16h14orf119 |
| XM_007258040.3 | mRNA | upstream | 84072 | 6864807 ~ 6891899 (+) | True | LOC103041213 |
| XM_007258038.3 | mRNA | upstream | 123708 | 6842902 ~ 6852263 (+) | True | LOC103040698 |
| XM_007258039.3 | mRNA | upstream | 123708 | 6842902 ~ 6852263 (+) | False | LOC103040698 |
| XM_022677925.1 | mRNA | downstream | 6182 | 6995553 ~ 7004249 (+) | True | LOC103024705 |
| XM_007258049.3 | mRNA | downstream | 16093 | 7005464 ~ 7018530 (+) | True | LOC103043453 |
| XM_007258052.2 | mRNA | downstream | 52189 | 7041560 ~ 7046298 (+) | True | LOC103044361 |
| XM_007258067.2 | mRNA | downstream | 170649 | 7160020 ~ 7162262 (+) | True | LOC103025339 |
| XM_007258057.2 | mRNA | downstream | 175413 | 7164784 ~ 7184403 (+) | True | psmb5 |
| TU188586 | other | upstream | 708584 | 6266816 ~ 6267387 (+) | True | G139282 |
| XR_002651011.1 | other | upstream | 733400 | 6238156 ~ 6242571 (+) | True | LOC103028159 |
| TU188563 | other | upstream | 815805 | 6159720 ~ 6160166 (+) | True | G139268 |
| LOC111194289 | other | upstream | 832070 | 6143375 ~ 6143901 (+) | True | LOC111194289 |
| LOC111194229 | other | upstream | 834373 | 6141005 ~ 6141598 (+) | True | LOC111194229 |
| TU188724 | other | downstream | 52303 | 7041674 ~ 7046288 (+) | False | LOC103044361 |
| TU189488 | other | downstream | 2171962 | 9161333 ~ 9162505 (+) | True | LOC103030954 |
| TU189503 | other | downstream | 2233238 | 9222609 ~ 9223156 (+) | False | LOC103030224 |
| TU189594 | other | downstream | 2550404 | 9539775 ~ 9540810 (+) | True | G140062 |
| TU189643 | other | downstream | 2754327 | 9743698 ~ 9745355 (+) | True | G140103 |
