RNA id: trnan-guu_3


Basic Information

Item Value
RNA id trnan-guu_3
length 74
RNA type tRNA
GC content 0.61
exon number 1
gene id trnan-guu_3
representative True

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 40611539 ~ 40611612 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

gtctctgtggcgCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTTGGTGGTTCGAGCCCACCCAGGGACG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU200295 lncRNA downstream 14506 40596131 ~ 40597033 (-) True G148024
TU200277 lncRNA downstream 78869 40529090 ~ 40532670 (-) True G148012
TU200132 lncRNA downstream 426191 40140236 ~ 40185348 (-) True G147914
TU200113 lncRNA downstream 499786 40111304 ~ 40111753 (-) True G147897
TU200084 lncRNA downstream 664109 39890117 ~ 39947430 (-) True G147872
TU200328 lncRNA upstream 17859 40629471 ~ 40629687 (-) True G148052
TU200334 lncRNA upstream 22717 40634329 ~ 40641995 (-) True G148057
TU200335 lncRNA upstream 31534 40643146 ~ 40643407 (-) True G148058
TU200333 lncRNA upstream 64347 40675959 ~ 40692649 (-) True G148056
TU200362 lncRNA upstream 161038 40772650 ~ 40782001 (-) True G148077
XM_007250154.3 mRNA downstream 763019 39845890 ~ 39848520 (-) True pop7
XM_007250157.3 mRNA downstream 793776 39815907 ~ 39817763 (-) True ufsp1
XM_007250161.3 mRNA downstream 1113305 39490561 ~ 39498234 (-) True tmem256
XM_022678551.1 mRNA downstream 1126877 39467363 ~ 39484662 (-) True LOC103028039
XM_007250162.3 mRNA downstream 1213545 39275642 ~ 39397994 (-) False fgf11
XM_022678559.1 mRNA upstream 173900 40785512 ~ 40792759 (-) True ankrd53
XM_022678558.1 mRNA upstream 173900 40785512 ~ 40792733 (-) False ankrd53
XM_015602604.2 mRNA upstream 212469 40824081 ~ 40833786 (-) True LOC103041524
XM_022678345.1 mRNA upstream 297245 40908857 ~ 40909862 (-) True LOC111194366
XM_022678347.1 mRNA upstream 408716 41020328 ~ 41023008 (-) True LOC111194367
TU200007 other downstream 789964 39820751 ~ 39821575 (-) True G147828
TU200005 other downstream 793939 39816718 ~ 39817600 (-) False ufsp1
TU199886 other downstream 1113325 39491662 ~ 39498214 (-) False tmem256
TU199853 other downstream 1213527 39265349 ~ 39398012 (-) True fgf11
TU199810 other downstream 1487751 39117310 ~ 39123788 (-) False LOC103036465
trnan-guu_4 other upstream 346 40611958 ~ 40612031 (-) True trnan-guu_4
trnan-guu_5 other upstream 765 40612377 ~ 40612450 (-) True trnan-guu_5
trnan-guu_6 other upstream 1184 40612796 ~ 40612869 (-) True trnan-guu_6
trnan-guu_7 other upstream 1603 40613215 ~ 40613288 (-) True trnan-guu_7
trnan-guu_8 other upstream 2022 40613634 ~ 40613707 (-) True trnan-guu_8

Expression Profile