Item | Value |
---|---|
RNA id | TU53157 |
length | 272 |
lncRNA type | inter_gene |
GC content | 0.51 |
exon number | 1 |
gene id | G39457 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_035901.1 |
NCBI id | CM008304.1 |
chromosome length | 40584741 |
location | 547081 ~ 547352 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
species | mexican tetra (Astyanax mexicanus) |
id | name | namespace |
---|---|---|
GO:0010035 | response to inorganic substance | biological_process |
GO:0010038 | response to metal ion | biological_process |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU53152 | lncRNA | upstream | 7253 | 539498 ~ 539828 (+) | True | G39452 |
TU53053 | lncRNA | upstream | 8749 | 537105 ~ 538332 (+) | True | G39372 |
TU53054 | lncRNA | upstream | 8749 | 537284 ~ 538332 (+) | False | G39372 |
TU53052 | lncRNA | upstream | 9102 | 537284 ~ 537979 (+) | False | G39372 |
TU53025 | lncRNA | upstream | 134893 | 411135 ~ 412188 (+) | True | G39349 |
TU53159 | lncRNA | downstream | 257 | 547609 ~ 547813 (+) | True | G39459 |
XR_002649914.1 | lncRNA | downstream | 54504 | 601856 ~ 603927 (+) | True | LOC111192489 |
TU53215 | lncRNA | downstream | 165481 | 712833 ~ 715218 (+) | True | G39504 |
TU53217 | lncRNA | downstream | 198216 | 745568 ~ 749938 (+) | True | G39506 |
TU53218 | lncRNA | downstream | 198216 | 745568 ~ 750620 (+) | False | G39506 |
XM_022669471.1 | mRNA | upstream | 13454 | 479272 ~ 533627 (+) | True | cp |
XM_007234270.3 | mRNA | upstream | 75877 | 461480 ~ 471204 (+) | True | LOC103032607 |
XM_022669469.1 | mRNA | upstream | 99766 | 417368 ~ 447315 (+) | True | LOC103032290 |
XM_015601581.2 | mRNA | upstream | 99766 | 417385 ~ 447315 (+) | False | LOC103032290 |
XM_022669467.1 | mRNA | upstream | 168582 | 297269 ~ 378499 (+) | False | wwtr1 |
XM_022669472.1 | mRNA | downstream | 70805 | 618157 ~ 637895 (+) | True | LOC103036425 |
XM_007239785.3 | mRNA | downstream | 70806 | 618158 ~ 637895 (+) | False | LOC103036425 |
XM_007239783.3 | mRNA | downstream | 124529 | 671881 ~ 681622 (+) | False | immp1l |
XM_007239784.2 | mRNA | downstream | 124721 | 672073 ~ 681622 (+) | False | immp1l |
XM_022669474.1 | mRNA | downstream | 128397 | 675749 ~ 681622 (+) | True | immp1l |
XR_002649913.1 | other | upstream | 256059 | 281585 ~ 291022 (+) | False | commd2 |
XR_455709.3 | other | downstream | 375405 | 922757 ~ 963284 (+) | False | plekho2 |
TU53369 | other | downstream | 659435 | 1206787 ~ 1209096 (+) | True | G39619 |
TU53383 | other | downstream | 672454 | 1219806 ~ 1220486 (+) | True | G39626 |
TU53498 | other | downstream | 863094 | 1410446 ~ 1413799 (+) | False | LOC111192494 |
TU53707 | other | downstream | 1232339 | 1779691 ~ 1782660 (+) | False | muc2 |