Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU53215 |
| length | 200 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G39504 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 712833 ~ 715218 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002649914.1 | lncRNA | upstream | 108906 | 601856 ~ 603927 (+) | True | LOC111192489 |
| TU53159 | lncRNA | upstream | 165020 | 547609 ~ 547813 (+) | True | G39459 |
| TU53157 | lncRNA | upstream | 165481 | 547081 ~ 547352 (+) | True | G39457 |
| TU53152 | lncRNA | upstream | 173005 | 539498 ~ 539828 (+) | True | G39452 |
| TU53054 | lncRNA | upstream | 174501 | 537284 ~ 538332 (+) | False | G39372 |
| TU53217 | lncRNA | downstream | 30350 | 745568 ~ 749938 (+) | True | G39506 |
| TU53218 | lncRNA | downstream | 30350 | 745568 ~ 750620 (+) | False | G39506 |
| TU53223 | lncRNA | downstream | 35604 | 750822 ~ 753837 (+) | True | G39511 |
| TU53225 | lncRNA | downstream | 52120 | 767338 ~ 767614 (+) | True | G39512 |
| TU53243 | lncRNA | downstream | 164467 | 879685 ~ 879896 (+) | True | G39529 |
| XM_007239783.3 | mRNA | upstream | 31211 | 671881 ~ 681622 (+) | False | immp1l |
| XM_007239784.2 | mRNA | upstream | 31211 | 672073 ~ 681622 (+) | False | immp1l |
| XM_022669474.1 | mRNA | upstream | 31211 | 675749 ~ 681622 (+) | True | immp1l |
| XM_022669472.1 | mRNA | upstream | 74938 | 618157 ~ 637895 (+) | True | LOC103036425 |
| XM_007239785.3 | mRNA | upstream | 74938 | 618158 ~ 637895 (+) | False | LOC103036425 |
| XM_007260221.3 | mRNA | downstream | 207539 | 922757 ~ 963284 (+) | True | plekho2 |
| XM_022669475.1 | mRNA | downstream | 259719 | 974937 ~ 1000284 (+) | True | ankdd1a |
| XM_007260222.3 | mRNA | downstream | 296421 | 1011639 ~ 1036934 (+) | True | clpx |
| XM_007260223.3 | mRNA | downstream | 296421 | 1011639 ~ 1036934 (+) | False | clpx |
| XM_022670130.1 | mRNA | downstream | 323355 | 1038573 ~ 1045347 (+) | True | pdcd7 |
| XR_002649913.1 | other | upstream | 421811 | 281585 ~ 291022 (+) | False | commd2 |
| XR_455709.3 | other | downstream | 207539 | 922757 ~ 963284 (+) | False | plekho2 |
| TU53369 | other | downstream | 491569 | 1206787 ~ 1209096 (+) | True | G39619 |
| TU53383 | other | downstream | 504588 | 1219806 ~ 1220486 (+) | True | G39626 |
| TU53498 | other | downstream | 695228 | 1410446 ~ 1413799 (+) | False | LOC111192494 |
| TU53707 | other | downstream | 1064473 | 1779691 ~ 1782660 (+) | False | muc2 |
