Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU53243 |
| length | 212 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G39529 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 879685 ~ 879896 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU53225 | lncRNA | upstream | 112071 | 767338 ~ 767614 (+) | True | G39512 |
| TU53223 | lncRNA | upstream | 125848 | 750822 ~ 753837 (+) | True | G39511 |
| TU53218 | lncRNA | upstream | 129065 | 745568 ~ 750620 (+) | False | G39506 |
| TU53217 | lncRNA | upstream | 129747 | 745568 ~ 749938 (+) | True | G39506 |
| TU53215 | lncRNA | upstream | 164467 | 712833 ~ 715218 (+) | True | G39504 |
| TU53256 | lncRNA | downstream | 85032 | 964928 ~ 967328 (+) | True | G39539 |
| TU53274 | lncRNA | downstream | 164212 | 1044108 ~ 1045342 (+) | False | pdcd7 |
| XR_002649915.1 | lncRNA | downstream | 273648 | 1153544 ~ 1159078 (+) | True | LOC111192491 |
| TU53349 | lncRNA | downstream | 273720 | 1153616 ~ 1159066 (+) | False | LOC111192491 |
| TU53366 | lncRNA | downstream | 305676 | 1185572 ~ 1186479 (+) | True | G39616 |
| XM_007239783.3 | mRNA | upstream | 198063 | 671881 ~ 681622 (+) | False | immp1l |
| XM_007239784.2 | mRNA | upstream | 198063 | 672073 ~ 681622 (+) | False | immp1l |
| XM_022669474.1 | mRNA | upstream | 198063 | 675749 ~ 681622 (+) | True | immp1l |
| XM_022669472.1 | mRNA | upstream | 241790 | 618157 ~ 637895 (+) | True | LOC103036425 |
| XM_007260221.3 | mRNA | downstream | 42861 | 922757 ~ 963284 (+) | True | plekho2 |
| XM_022669475.1 | mRNA | downstream | 95041 | 974937 ~ 1000284 (+) | True | ankdd1a |
| XM_007260222.3 | mRNA | downstream | 131743 | 1011639 ~ 1036934 (+) | True | clpx |
| XM_007260223.3 | mRNA | downstream | 131743 | 1011639 ~ 1036934 (+) | False | clpx |
| XM_022670130.1 | mRNA | downstream | 158677 | 1038573 ~ 1045347 (+) | True | pdcd7 |
| XR_002649913.1 | other | upstream | 588663 | 281585 ~ 291022 (+) | False | commd2 |
| XR_455709.3 | other | downstream | 42861 | 922757 ~ 963284 (+) | False | plekho2 |
| TU53369 | other | downstream | 326891 | 1206787 ~ 1209096 (+) | True | G39619 |
| TU53383 | other | downstream | 339910 | 1219806 ~ 1220486 (+) | True | G39626 |
| TU53498 | other | downstream | 530550 | 1410446 ~ 1413799 (+) | False | LOC111192494 |
| TU53707 | other | downstream | 899795 | 1779691 ~ 1782660 (+) | False | muc2 |
