Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU53439 |
| length | 881 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 8 |
| gene id | G39662 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 1327223 ~ 1334616 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU53458 | lncRNA | upstream | 3016 | 1323881 ~ 1324207 (+) | True | G39673 |
| XR_002649918.1 | lncRNA | upstream | 27396 | 1298971 ~ 1299827 (+) | True | LOC111192495 |
| TU53446 | lncRNA | upstream | 42778 | 1282321 ~ 1284445 (+) | True | G39666 |
| TU53445 | lncRNA | upstream | 46778 | 1279514 ~ 1280445 (+) | True | G39665 |
| TU53437 | lncRNA | upstream | 55995 | 1270591 ~ 1271228 (+) | True | G39661 |
| TU53465 | lncRNA | downstream | 5207 | 1339823 ~ 1351454 (+) | False | G39676 |
| TU53469 | lncRNA | downstream | 5207 | 1339823 ~ 1342388 (+) | True | G39676 |
| TU53471 | lncRNA | downstream | 5207 | 1339823 ~ 1340984 (+) | False | G39676 |
| TU53474 | lncRNA | downstream | 5207 | 1339823 ~ 1342388 (+) | False | G39676 |
| XR_002649917.1 | lncRNA | downstream | 75814 | 1410430 ~ 1413779 (+) | True | LOC111192494 |
| XM_007260233.3 | mRNA | upstream | 20982 | 1292789 ~ 1306241 (+) | True | LOC103026058 |
| XM_022669483.1 | mRNA | upstream | 58847 | 1265857 ~ 1268376 (+) | True | LOC111192492 |
| XM_022669482.1 | mRNA | upstream | 58847 | 1266624 ~ 1268376 (+) | False | LOC111192492 |
| XM_022669481.1 | mRNA | upstream | 58847 | 1267865 ~ 1268376 (+) | False | LOC111192492 |
| XM_022669479.1 | mRNA | upstream | 132477 | 1159773 ~ 1194746 (+) | False | ap2a2 |
| XM_015608586.2 | mRNA | downstream | 85775 | 1420391 ~ 1427117 (+) | True | polr2l |
| XM_007260235.3 | mRNA | downstream | 106139 | 1440755 ~ 1445223 (+) | True | sdhaf2 |
| XM_007260240.2 | mRNA | downstream | 366221 | 1700837 ~ 1705998 (+) | True | rplp2 |
| XM_022670136.1 | mRNA | downstream | 426611 | 1761227 ~ 1794932 (+) | True | muc2 |
| XM_022670138.1 | mRNA | downstream | 474986 | 1809602 ~ 1836384 (+) | True | LOC103030943 |
| TU53383 | other | upstream | 106737 | 1219806 ~ 1220486 (+) | True | G39626 |
| TU53369 | other | upstream | 118127 | 1206787 ~ 1209096 (+) | True | G39619 |
| XR_455709.3 | other | upstream | 363939 | 922757 ~ 963284 (+) | False | plekho2 |
| XR_002649913.1 | other | upstream | 1036201 | 281585 ~ 291022 (+) | False | commd2 |
| TU53498 | other | downstream | 75830 | 1410446 ~ 1413799 (+) | False | LOC111192494 |
| TU53707 | other | downstream | 445075 | 1779691 ~ 1782660 (+) | False | muc2 |
| TU53710 | other | downstream | 446866 | 1781482 ~ 1785093 (+) | False | muc2 |
| TU53705 | other | downstream | 448808 | 1783424 ~ 1784344 (+) | False | muc2 |
| TU53708 | other | downstream | 448808 | 1783424 ~ 1786521 (+) | False | muc2 |
