Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU53471 |
| length | 882 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G39676 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035901.1 |
| NCBI id | CM008304.1 |
| chromosome length | 40584741 |
| location | 1339823 ~ 1351454 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU53439 | lncRNA | upstream | 5207 | 1327223 ~ 1334616 (+) | True | G39662 |
| TU53442 | lncRNA | upstream | 9043 | 1327554 ~ 1330780 (+) | False | G39662 |
| TU53458 | lncRNA | upstream | 15616 | 1323881 ~ 1324207 (+) | True | G39673 |
| XR_002649918.1 | lncRNA | upstream | 39996 | 1298971 ~ 1299827 (+) | True | LOC111192495 |
| TU53446 | lncRNA | upstream | 55378 | 1282321 ~ 1284445 (+) | True | G39666 |
| XR_002649917.1 | lncRNA | downstream | 69446 | 1410430 ~ 1413779 (+) | True | LOC111192494 |
| TU53507 | lncRNA | downstream | 79440 | 1420424 ~ 1427113 (+) | False | polr2l |
| TU53511 | lncRNA | downstream | 87708 | 1428692 ~ 1429975 (+) | True | G39698 |
| TU53524 | lncRNA | downstream | 117254 | 1458238 ~ 1459551 (+) | True | G39704 |
| TU53543 | lncRNA | downstream | 248178 | 1589162 ~ 1589972 (+) | True | G39717 |
| XM_007260233.3 | mRNA | upstream | 33582 | 1292789 ~ 1306241 (+) | True | LOC103026058 |
| XM_022669483.1 | mRNA | upstream | 71447 | 1265857 ~ 1268376 (+) | True | LOC111192492 |
| XM_022669482.1 | mRNA | upstream | 71447 | 1266624 ~ 1268376 (+) | False | LOC111192492 |
| XM_022669481.1 | mRNA | upstream | 71447 | 1267865 ~ 1268376 (+) | False | LOC111192492 |
| XM_022669479.1 | mRNA | upstream | 145077 | 1159773 ~ 1194746 (+) | False | ap2a2 |
| XM_015608586.2 | mRNA | downstream | 79407 | 1420391 ~ 1427117 (+) | True | polr2l |
| XM_007260235.3 | mRNA | downstream | 99771 | 1440755 ~ 1445223 (+) | True | sdhaf2 |
| XM_007260240.2 | mRNA | downstream | 359853 | 1700837 ~ 1705998 (+) | True | rplp2 |
| XM_022670136.1 | mRNA | downstream | 420243 | 1761227 ~ 1794932 (+) | True | muc2 |
| XM_022670138.1 | mRNA | downstream | 468618 | 1809602 ~ 1836384 (+) | True | LOC103030943 |
| TU53383 | other | upstream | 119337 | 1219806 ~ 1220486 (+) | True | G39626 |
| TU53369 | other | upstream | 130727 | 1206787 ~ 1209096 (+) | True | G39619 |
| XR_455709.3 | other | upstream | 376539 | 922757 ~ 963284 (+) | False | plekho2 |
| XR_002649913.1 | other | upstream | 1048801 | 281585 ~ 291022 (+) | False | commd2 |
| TU53498 | other | downstream | 69462 | 1410446 ~ 1413799 (+) | False | LOC111192494 |
| TU53707 | other | downstream | 438707 | 1779691 ~ 1782660 (+) | False | muc2 |
| TU53710 | other | downstream | 440498 | 1781482 ~ 1785093 (+) | False | muc2 |
| TU53705 | other | downstream | 442440 | 1783424 ~ 1784344 (+) | False | muc2 |
| TU53708 | other | downstream | 442440 | 1783424 ~ 1786521 (+) | False | muc2 |
